Gene Swit_2398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2398 
Symbol 
ID5196808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2664998 
End bp2666002 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content70% 
IMG OID640581944 
Producthypothetical protein 
Protein accessionYP_001262895 
Protein GI148555313 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.290097 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.943212 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTCG CCGTCCCGTT CCTGCTGGCC CTGGCCTCCC CGCTCCCGGC CGCGCCGTTC 
ACCGTCGAGG AGACGGGCGC CGGGTTCGCG ACCCTCGCCG GGGCGGTCGC GGCGGTCGGT
GATCGCACTG CGACGATCCG CATCGCGCCG GGCCGCTATG GCGACTGCGT GGTGCAGATA
GCGGGGCGGA TCACCTATCG CGCCGAACGG CCGCTGACCG CGATCTTCGA CGGGGGCATC
TGCGAGGGCA AGGCGGTGCT GGTGCTGCGC GGGCGGGGCG CGGTGGTCGA CGGGCTGGTG
TTCCGCAACC TGCGCGTCGC CGACGGCAAC GGCGCCGGCA TCCGCATCGA GCGGGGACCG
CTGTCCGTCG CCAACAGCCT GTTCCGCGAT TCGGAGGAGG GCATCCTCGG CGGCGGCGAC
GATCCCGCCA GCGACATCGT CATCGACCGG TCGACCTTCA TCGGCCTCGG CCGCTGCGAC
CGCGGCCTCG CCTGCGCGCA CTCGATCTAC CTCAGTGCCT TCCGTTCGGT GACGGTCCGC
CGCAGCCGCT TCGAGCAGGG GCAGGGCGGC CATTATGTGA AGAGCCGGTC GCCGCGCATC
CTGATCGCCG ATTGCAGCTT CGACGACAGC CAGGGACGCG CCACCAACTA TATGATCGAC
CTGCCCGAGG GCGCGATCGG GCGGATCGAG CGCAACATCT TCGTCCAGGG CGCCGACAAG
GACAACCACG CCGCGCTGAT CGCTGTCGCG GCCGAAAGCC GCCGCAATCC CTCGGCCGGG
CTGGAAGTGG TGCGCAACCG CGCGCAGCAG GTGTCGAGCG CCGCCTGGCC GACCAGCCTG
ATCGCCGACT GGAGCGGATC GCCCAAGGCC GTCGAGGGCA ATATGCTGGG CGGGCGGATC
GATCCCTATC TGGCGATCAA GCCCGAGACG CCCTCCTTCA CCGCGCGGGT CAAGCGCCGG
CTGTACGGCT ATGCGATTCG CTTCAGGGAA TGGTTGGCCG GCTGA
 
Protein sequence
MRFAVPFLLA LASPLPAAPF TVEETGAGFA TLAGAVAAVG DRTATIRIAP GRYGDCVVQI 
AGRITYRAER PLTAIFDGGI CEGKAVLVLR GRGAVVDGLV FRNLRVADGN GAGIRIERGP
LSVANSLFRD SEEGILGGGD DPASDIVIDR STFIGLGRCD RGLACAHSIY LSAFRSVTVR
RSRFEQGQGG HYVKSRSPRI LIADCSFDDS QGRATNYMID LPEGAIGRIE RNIFVQGADK
DNHAALIAVA AESRRNPSAG LEVVRNRAQQ VSSAAWPTSL IADWSGSPKA VEGNMLGGRI
DPYLAIKPET PSFTARVKRR LYGYAIRFRE WLAG