Gene Swit_2389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2389 
Symbol 
ID5198726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2653290 
End bp2653799 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content68% 
IMG OID640581935 
Producthypothetical protein 
Protein accessionYP_001262886 
Protein GI148555304 
COG category[R] General function prediction only 
COG ID[COG0319] Predicted metal-dependent hydrolase 
TIGRFAM ID[TIGR00043] metalloprotein, YbeY/UPF0054 family 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAG TCGCGGTACA GGCGGAGCCC GACTGGGCGG ACGGCACCGA CTGGGAAAGG 
CTGGCGATCG AGGCGGTGAC GGCGGCGATG CGGACGACGC CGCACGCCGC GATGCTCGAT
GCCGCCTATA TGGCCGAGGT GTCGATCCGG CTGACCGACG ACGACGAGGT CCACGCGCTC
AACCGCCAAT ATCGCCAGAA GGACAAGCCC ACCAACGTGC TGAGCTTCCC GATGGTGCAG
GACGACCTGA TCGAGGGGCT CGACAACAGC GACGACGGCG AGGTGCTGCT CGGCGACATC
ATCCTCGCGC GCGGGGTCTG CGTGCGCGAG GCGGCCGAGA AGGGCGTGCC GACCGCCGAG
CATGCGACCC ATCTGATCGT CCACGGCACG CTCCACCTGC TCGGCTACGA CCATATCGAG
GACGACGAGG CGGAGGCGAT GGAGGACCTG GAGCGCGTCG CGCTCGCCAC GCTCGGGATC
GACGACCCCT ACGCCATCAC CGAGGACTGA
 
Protein sequence
MIEVAVQAEP DWADGTDWER LAIEAVTAAM RTTPHAAMLD AAYMAEVSIR LTDDDEVHAL 
NRQYRQKDKP TNVLSFPMVQ DDLIEGLDNS DDGEVLLGDI ILARGVCVRE AAEKGVPTAE
HATHLIVHGT LHLLGYDHIE DDEAEAMEDL ERVALATLGI DDPYAITED