| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2388 |
|---|
| Symbol | |
|---|
| ID | 5198725 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 2652211 |
|---|
| End bp | 2653293 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640581934 |
|---|
| Product | PhoH family protein |
|---|
| Protein accession | YP_001262885 |
|---|
| Protein GI | 148555303 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1702] Phosphate starvation-inducible protein PhoH, predicted ATPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.156507 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTCGAA ATGCGCGTAG GATCGTTGAC ACCCGACGAC ACCCCGTCAG GGGGTCGATA
AAGGAAAGGA AACCGCCGCT CCTTATGTCG CGCAAGCCCG TTCCCGCGCA GGCCGGAGAT
CGCGCCCGGC TAGAGATCCT CTTCGACAAA CCCCAGCTCC TCGGCCGATT GTTCGGTGAG
TTCGACCAGA ATCTGGTGGC GATCGAAAAC CGGCTGGGGG TCTATATAGC GGCCCGGGGG
AACAAGCTGC AGATAGAGGG TGAGGCCGAG GCCGCGGGGC GCGCCCGCGA GGTGCTGACC
GGGCTCTACA ACCGGATCGT CCAGGGCCAG GACCTCGACA CCGGCGCCGT CGAGGCGGTG
ATCGCGATGT CGGCCGAGCC GACGCTGGAG GGCATCATCC GCAACGACGT CTCCGATCCG
CCCAAGGTGA TGATCCGGAC GCGCAAGAAG ACGATCGTCC CGCGCTCCGC CACCCAGATC
CGCTACATGG AGGCGCTCAA CCGCTCTGAC ATCATCTTCG CGCTGGGCCC GGCGGGCACG
GGCAAGACCT ATCTGGCGGT GGCGCAGGCG GTGCAGCAGC TCATCCAGGG CACGGTCGAC
CGGCTGATCC TGTCGCGCCC GGCGGTCGAG GCGGGCGAGC GGCTCGGCTT CCTGCCCGGC
GACATGAAGG AGAAGGTCGA TCCCTATCTC CGCCCGCTCT ACGATGCGCT CTACGACATG
CTGCCGACCG AGCAGGTCGA GCGCCGCATC GCCAGCGGCG AGATCGAGAT CGCACCGATC
GCCTTCATGC GCGGCCGCAC GCTGAGCGAC GCCTTCGTCA TCCTCGACGA GGCGCAGAAC
ACCACGCCCG CGCAGATGAA GATGTTCCTC ACCCGCTTCG GCCAGAACAG CCGCATGGTG
GTGTGCGGCG ATCCGCGCCA GATCGACCTT CCCGACATCG GCAAGTCGGG CCTCGCCGAC
GCGGTCGGCC GGCTCGAAGG GATAGAGGGG ATCGCGACGA TCCGCTTCGG CGCCGCCGAC
GTCGTCCGCC ACCCGATCGT TGGCCGCATC GTCGAGGCCT ATGAAGGGCC CGACAATCCA
TGA
|
|---|
| Protein sequence | MGRNARRIVD TRRHPVRGSI KERKPPLLMS RKPVPAQAGD RARLEILFDK PQLLGRLFGE
FDQNLVAIEN RLGVYIAARG NKLQIEGEAE AAGRAREVLT GLYNRIVQGQ DLDTGAVEAV
IAMSAEPTLE GIIRNDVSDP PKVMIRTRKK TIVPRSATQI RYMEALNRSD IIFALGPAGT
GKTYLAVAQA VQQLIQGTVD RLILSRPAVE AGERLGFLPG DMKEKVDPYL RPLYDALYDM
LPTEQVERRI ASGEIEIAPI AFMRGRTLSD AFVILDEAQN TTPAQMKMFL TRFGQNSRMV
VCGDPRQIDL PDIGKSGLAD AVGRLEGIEG IATIRFGAAD VVRHPIVGRI VEAYEGPDNP
|
|---|
| |