Gene Swit_2380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2380 
Symbol 
ID5198186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2646488 
End bp2647066 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content69% 
IMG OID640581926 
Productscaffold protein Nfu/NifU-like protein 
Protein accessionYP_001262877 
Protein GI148555295 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0694] Thioredoxin-like proteins and domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTCA TGCTGATCGA AACCGAACCG ACCCCCAATC CGGCGACGCT CAAATTCCTG 
CCCGGCCGCC CGGTGATGAC CACGGGGACC CGCGATTTCG TCGATCCGGA CGAGGCCTCG
GCCTCCCCGC TCGCCGAGGC GCTGTTCTCG CTCGGCGACG TGACCGGCGT CTTCTTCGGC
CGCGACTTCG TCTCGGTGAC GGCGGCCGAG GGGGTTGAGT GGACCGGGCT CAAGCCGCAG
GTGCTCGGCG TCCTGCTCGA TCATTTCTCG TCCGAGGCGC CGTTGTTCAC GGGCGGCAGC
GCCGCCGAGA TCGCGATCGA CGACAGCGAC TTCACCGATG ACCCGGCCGA CGCCGACATC
GTCGCGCAGA TCAAGGACCT GATCGATACG CGGGTGCGCC CGGCGGTGGC GCGCGACGGC
GGCGACATCG TCTATCGTGG CTTCCAGCGC GGCACCGTCT ACCTGTCGAT GCAGGGGGCC
TGTTCGGGCT GCCCGTCGTC GGCCGCGACG CTCAAGCAGG GCATCGAGAC CCTGCTGAAG
CATTATGTGC CCGAGGTGAC CGAGGTCCGG GCCGCCTGA
 
Protein sequence
MTLMLIETEP TPNPATLKFL PGRPVMTTGT RDFVDPDEAS ASPLAEALFS LGDVTGVFFG 
RDFVSVTAAE GVEWTGLKPQ VLGVLLDHFS SEAPLFTGGS AAEIAIDDSD FTDDPADADI
VAQIKDLIDT RVRPAVARDG GDIVYRGFQR GTVYLSMQGA CSGCPSSAAT LKQGIETLLK
HYVPEVTEVR AA