| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2364 |
|---|
| Symbol | |
|---|
| ID | 5198942 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 2627411 |
|---|
| End bp | 2628781 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640581910 |
|---|
| Product | glutamate--cysteine ligase |
|---|
| Protein accession | YP_001262861 |
|---|
| Protein GI | 148555279 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG3572] Gamma-glutamylcysteine synthetase |
|---|
| TIGRFAM ID | [TIGR01436] glutamate--cysteine ligase, plant type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.499784 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGC GCAAGGCCTC CGATGGCGAA GATCCCCTGA TCGAATCCCG CGAGGACCTG
CTGTCGGTCT TCGTCGGCGG CGAAAAGCCC AAGGATCGAT GGCGGATCGG CACCGAGCAC
GAGAAATTCG TGTTCTTCGA GGATTCGCAC CGCGCGCCCT CCTATGAGGA GCGCGGCGGC
ATCCACGCGC TGCTGATCGG GCTGACCAAA TATGGCTGGC GCCCGGTCTA CGAGGGCGAG
AACATCATCG CGCTCGAAGG CGAGGACGGC AATGTCAGCC TGGAGCCGGC GGGCCAGTTC
GAGCTGTCGG GCGCCCCGCT CGACAATCTC CACCAGACCT GCGCCGAGAC CGGCCGCCAC
CTCGAACAGG TCAAGGCGAT CGGCGAGAAG CTCGGCATCG GCTATCTCGG GCTCGGCCTG
TGGCCCGACA AGCGCCGCGA CGAGCTGCCG ATCATGCCCA AGGGCCGCTA CGACATCATG
CTGCGCCACA TGCCGCGCGT CGGCACGATG GGGCTCGACA TGATGCTGCG CACCTGCACC
GTCCAGACCA ACCTCGACTA TGCGAGCGAG GCGGACATGG TGCGTAAGTT CCGCCTCAGC
CTGGCGCTGC AGCCGCTGGC GACCGCGCTG TTCGCCAACT CGCCCTTCCT GGAGGGCAAG
CCCAACGGCT TCCTCAGCTA TCGCAGCCAC ATCTGGACCG ACACCGATCC GCACCGCACC
GGCATGCTGC CGTTCGTGTT CGAGGACGGC TTCGGCTATG AACGCTACGC CGACTACATG
CTCGACGTGC CGATGTATTT CGCCTTCCGC GACGGCTATG TCGACGCGGC CGGGCTCAGC
TTCCGCGACT TCATGGACGG CAAGCTGCCG GTGCTGCCGG GCGAGCGGCC GACGATCGGC
GACTGGCAGG ACCATCTGTC GACCGCCTTC CCCGAGGTCC GGCTCAAGAG CTTCCTCGAG
ATGCGCGGCG CCGACGGCGG GCCGCACGAC CGGATCTGCG CGCTGCCGGC CTTCTGGGTC
GGCCTGCTCT ACGACGACGG CGCGCTCGAC GCCGCCTGGG ACCTGGTCAA GCACTGGACG
ATCGAGGACC ATCACCGCAT CCGCGCCGAC GTGCCGAAGC TCGGCCTGCG CGCCGCCGGA
CCGCGCGGGC GCAGCCTGCT CGACCTCGCG AAGATCGTGC TCGACATCGC GGCGGACGGG
CTGAAGGCGC GCGCCCGGCT GAACGGCGCG GGCGACGACG AGCGCGGCTT CCTCACCCCG
CTGCGCGAGA TCGTCGCGAG CGGCAAGACG CCGGCCGAGC GGCTGCTCGA TCTCTATCAT
GGCGCCTGGG GCGGCGACAT CAGCCACGTC TATCGCGACG CCCGCTTCTG A
|
|---|
| Protein sequence | MSTRKASDGE DPLIESREDL LSVFVGGEKP KDRWRIGTEH EKFVFFEDSH RAPSYEERGG
IHALLIGLTK YGWRPVYEGE NIIALEGEDG NVSLEPAGQF ELSGAPLDNL HQTCAETGRH
LEQVKAIGEK LGIGYLGLGL WPDKRRDELP IMPKGRYDIM LRHMPRVGTM GLDMMLRTCT
VQTNLDYASE ADMVRKFRLS LALQPLATAL FANSPFLEGK PNGFLSYRSH IWTDTDPHRT
GMLPFVFEDG FGYERYADYM LDVPMYFAFR DGYVDAAGLS FRDFMDGKLP VLPGERPTIG
DWQDHLSTAF PEVRLKSFLE MRGADGGPHD RICALPAFWV GLLYDDGALD AAWDLVKHWT
IEDHHRIRAD VPKLGLRAAG PRGRSLLDLA KIVLDIAADG LKARARLNGA GDDERGFLTP
LREIVASGKT PAERLLDLYH GAWGGDISHV YRDARF
|
|---|
| |