Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2363 |
Symbol | |
ID | 5198941 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 2626737 |
End bp | 2627369 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640581909 |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_001262860 |
Protein GI | 148555278 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.257572 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATGCGGT TGAAGGCGGG CGACGCGATC GCGCTGTTCG ACGACATGAG CGGCGAATGG CGCGCGGTGA TCGAGCAGGT CGGCAAGCGC GCCGTCGCCG TCCGCGTCGA GCAGCGGATG CGCGAGCGCG AGGCGGTGCC CGACCTGTGG CTGGTCGCCG CGCCGATCAA GAAGGGCCGG ATCGACTGGG TCGCGGAGAA GGCGTGCGAG CTGGGCGTCG CGCGCTGGCG GCCGGTGATC ACCCGGCGCA CCATCGTCGA CCGGTTGAAC CTCGACCGGC TGCGCGCGCA CATGATCGAG GCGGCCGAGC AGTGCGAGCG CACCGCGCTG CCGATCCTCG ACGAGCCGGT GAAGCTGAGC GCGATGCTGC GCGACTGGCC CGCCGACCGG GCGCTGATCT TCGCCGACGA GGAAGGCGGC ATGCCGATGG CCGAGGCGGT GAAGCCCGGC CCGGCGGCGA TCCTGATCGG CCCCGAAGGC GGCTTCACCG ACGAGGAGCG CGCCGCGATC CTGGCGGTGC CGCAGGCGGT CGGCGTGTCG CTCGGCCCGC GCATCCTGCG CGCCGATACG GCGATGGCGG CGGCGGTCGC ACTGTGGATG GGACTGGCCG GCGACTGGCG CTCCGGACAA TAA
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Protein sequence | MMRLKAGDAI ALFDDMSGEW RAVIEQVGKR AVAVRVEQRM REREAVPDLW LVAAPIKKGR IDWVAEKACE LGVARWRPVI TRRTIVDRLN LDRLRAHMIE AAEQCERTAL PILDEPVKLS AMLRDWPADR ALIFADEEGG MPMAEAVKPG PAAILIGPEG GFTDEERAAI LAVPQAVGVS LGPRILRADT AMAAAVALWM GLAGDWRSGQ
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