Gene Swit_2363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2363 
Symbol 
ID5198941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2626737 
End bp2627369 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content73% 
IMG OID640581909 
Product16S ribosomal RNA methyltransferase RsmE 
Protein accessionYP_001262860 
Protein GI148555278 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.257572 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATGCGGT TGAAGGCGGG CGACGCGATC GCGCTGTTCG ACGACATGAG CGGCGAATGG 
CGCGCGGTGA TCGAGCAGGT CGGCAAGCGC GCCGTCGCCG TCCGCGTCGA GCAGCGGATG
CGCGAGCGCG AGGCGGTGCC CGACCTGTGG CTGGTCGCCG CGCCGATCAA GAAGGGCCGG
ATCGACTGGG TCGCGGAGAA GGCGTGCGAG CTGGGCGTCG CGCGCTGGCG GCCGGTGATC
ACCCGGCGCA CCATCGTCGA CCGGTTGAAC CTCGACCGGC TGCGCGCGCA CATGATCGAG
GCGGCCGAGC AGTGCGAGCG CACCGCGCTG CCGATCCTCG ACGAGCCGGT GAAGCTGAGC
GCGATGCTGC GCGACTGGCC CGCCGACCGG GCGCTGATCT TCGCCGACGA GGAAGGCGGC
ATGCCGATGG CCGAGGCGGT GAAGCCCGGC CCGGCGGCGA TCCTGATCGG CCCCGAAGGC
GGCTTCACCG ACGAGGAGCG CGCCGCGATC CTGGCGGTGC CGCAGGCGGT CGGCGTGTCG
CTCGGCCCGC GCATCCTGCG CGCCGATACG GCGATGGCGG CGGCGGTCGC ACTGTGGATG
GGACTGGCCG GCGACTGGCG CTCCGGACAA TAA
 
Protein sequence
MMRLKAGDAI ALFDDMSGEW RAVIEQVGKR AVAVRVEQRM REREAVPDLW LVAAPIKKGR 
IDWVAEKACE LGVARWRPVI TRRTIVDRLN LDRLRAHMIE AAEQCERTAL PILDEPVKLS
AMLRDWPADR ALIFADEEGG MPMAEAVKPG PAAILIGPEG GFTDEERAAI LAVPQAVGVS
LGPRILRADT AMAAAVALWM GLAGDWRSGQ