Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2329 |
Symbol | |
ID | 5197499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 2587105 |
End bp | 2588943 |
Gene Length | 1839 bp |
Protein Length | 612 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640581875 |
Product | cobalt chelatase, pCobT subunit |
Protein accession | YP_001262826 |
Protein GI | 148555244 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4547] Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase) |
TIGRFAM ID | [TIGR01651] cobaltochelatase, CobT subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.287563 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGACC AATCCCCCAT CGAAGGCTTC CGGCTCGTCC TGGGCGGCAC CGCCCGGGCG ATGGCGCGCG ATCCCGAGCT CGAACTGAGC TTCACCGCCG AGGCGCCTTC CTTCTCGCTC AAGCAGCTCC GCGTGCCGAT GCCGTCGCGC AACCTGCCGG CACAGGCGGT GGCCGAGGCG CGCGGCTTCG CCGACGGCTT CGCGCTGCGG GCGCGCCATC ACGACACCCG CATCCACGAG CGCGCCGCGC CGGCCGAGCC GATCGCGCGC GCCGTCCACG ACGCGGTCGA ACAGGCGCGG GTCGAGGCGA TCGGGTCGCG CGCGATGGCG GGCGTCCGCG ACAATCTCAA CAAGGCGCTC GAGGTGCGGC TGCGCTCCGA TCCGCTGGTG CGGGCGCGGG TGCGCGAGGA AGTGCCGCTG TCGACCGCGA TCGGCCTGCT GGTGCGCGAG CGGCTGACCG GCCAGCCGGC GCCAGCGATC GCCGCGCCGG GCCTCGCCCT GGTGCGCGAC TGGATCGAGG AGAAGGCGGG CAAGGACCTC GACGCGCTCC AGCTCGCCTT TGACGACCAG GCGGCTTTCG CCAGGCTGAT CGGCCGGCTG CTCGAGGATC TCGAGCTGAC CGAGGGCGAG CAGCTTCCCG AGACCGATCC CGAGGCCGGC GACAACGACG AGGGCGAGGA TCAGGAGGAA GGCCAGGACC AGCAGGACGA GGGCGAGGAT TCGGGCGGGT CGAGCGACTC CGAGGTCGAG ATGCGCGCCG AGCAGTCCGA GGGCGGCGAG GAGGAGGGCG AGCAGCGCGA GCTCGACCAG GACAGCGAGT CCGAGATGGA CAGCGACATG GGCGACGACG GCGAGGAGGG CATGATGCCC GTCCGCCCGA ACCGCCCGAT GTCCGATCTG CCGCCGGGCT TCGACTATCA TGCCTATACG ACCCAGTTCG ACGAGGAGAT CGCCGCCACC GAGCTGTGCG ACGACGAGGA GCTGACGCGG CTGCGCGCCT ATCTCGACCA GCAGCTCGTC CACCTCCAGG GCGCGGTCAC CAAGCTCGCC AACCGGCTGC AGCGCCGGCT GATGGCGCAG CAGAACCGAA GCTGGGACTT CGACCAGGAG GAGGGGATGC TCGACGCCGC GCGGCTCGCC CGCGTCGTCG TCAACCCGGC CCATTCGCTG AGCTACAAGA TCGAGCGCGA CACCGATTTC CGCGACACCG TCGTCACCCT GCTGATCGAC AATTCGGGGT CGATGCGCGG GCGGCCGATC TCGATCGCGG CGATCTGCGG CGACATCCTG GCGCGCACGC TCGAACGCTG CGCGGTCAAG ACCGAGATAT TGGGCTTCAC CACCCGCGCC TGGAAGGGCG GCCAGTCGCG CGAGGCCTGG CTGGCGGCGG GGCGCCCGCC CGCGCCGGGG CGGCTCAACG ACCTGCGCCA CATCGTCTAC AAGAAGGCCG ACGACCCCTG GCGCCGCGCG CGCAAGTCGC TCGGCCTGAT GATGCGCGAA GGGCTGCTCA AGGAGAATAT CGACGGCGAG GCGCTGATGT GGGCGCATAA CCGGCTGATC GCCCGGCGCG AGGAGCGCAA GATCCTGATG GTGATCTCCG ACGGCGCTCC GGTCGACGAT TCGACCCTGT CGGTCAACAA CGGCTCCTAT CTGGAGCGGC ACCTGCGCCA GATGATCGGC TGGATCGAGA ATCGCTCGCC GGTCGAGCTG ATCGCGATCG GCATCGGTCA CGACGTGACC CGCTATTACC AGCGCGCGGT GACGATCATG GACGTCGAGC AGCTCGGCGG CACCATGGTC GAGCAGCTTG CTGCTTTGTT TGATTTGGAA CCGCGCTAG
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Protein sequence | MADQSPIEGF RLVLGGTARA MARDPELELS FTAEAPSFSL KQLRVPMPSR NLPAQAVAEA RGFADGFALR ARHHDTRIHE RAAPAEPIAR AVHDAVEQAR VEAIGSRAMA GVRDNLNKAL EVRLRSDPLV RARVREEVPL STAIGLLVRE RLTGQPAPAI AAPGLALVRD WIEEKAGKDL DALQLAFDDQ AAFARLIGRL LEDLELTEGE QLPETDPEAG DNDEGEDQEE GQDQQDEGED SGGSSDSEVE MRAEQSEGGE EEGEQRELDQ DSESEMDSDM GDDGEEGMMP VRPNRPMSDL PPGFDYHAYT TQFDEEIAAT ELCDDEELTR LRAYLDQQLV HLQGAVTKLA NRLQRRLMAQ QNRSWDFDQE EGMLDAARLA RVVVNPAHSL SYKIERDTDF RDTVVTLLID NSGSMRGRPI SIAAICGDIL ARTLERCAVK TEILGFTTRA WKGGQSREAW LAAGRPPAPG RLNDLRHIVY KKADDPWRRA RKSLGLMMRE GLLKENIDGE ALMWAHNRLI ARREERKILM VISDGAPVDD STLSVNNGSY LERHLRQMIG WIENRSPVEL IAIGIGHDVT RYYQRAVTIM DVEQLGGTMV EQLAALFDLE PR
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