Gene Swit_2327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2327 
Symbol 
ID5197497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2585312 
End bp2586370 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content69% 
IMG OID640581873 
Producthypothetical protein 
Protein accessionYP_001262824 
Protein GI148555242 
COG category[S] Function unknown 
COG ID[COG4246] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.519854 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.378191 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAACG CGCCTGTTGG CCGCCGTTCA GCTTCGCGAG GCACCCGGCC GGGCCGCGCG 
ATCGGTGGGA AGGCCTTTGG GAATCGGCCG TCTGGCGGTA TCGGCGGCGG CATGAGGAAG
CTGCTGGCCG CATTGCTGTT CTGCCTGGTG CCGGGATCGG CCGGCTTCCC GCAGGCGGAA
GTCAAGGTGG TGGCGACGCC GGTCCCGCTC GACCCGGACG ATCCGGCGCG GACGACGGTC
GGCCGGCTGC GCTATCTGGG CGGCTGGCAG CTCACCAGCC GGCAGCGCGA CTTCGGGGGC
TATTCGGCGC TTTCGGTGCA GGGGGATCGT TTCCTCGCTT TGTCCGACAC CGGCCACTAT
CTGCGCTTCC GCATCGCCGC CCCCGGCGTC GTCAGCGACA GCCGCTTCGG CGAGTTGCCG
GCCTTTCCCG GCTATGAGGG GCGCAAGGGG GATCGCGATT CGGAATCGAT GACGATCGGG
CCCGAGGGCG ACGTCTGGGT CGGCTTCGAA TATCACAACG CGATCCTGCG CTATTCGCCC
GACCTGACTC TGCTCCAGTC GATCGCCTTT CCCCCGGCGA TGAAGGACTG GTCGCGCAAT
TCGGGGCCCG AGGCGATGGT CCGGCTGGCC GGCGGACGTT TCGTCGTGTT CGCCGAGGGG
CGGGCGATCG CGCCGCACGT CCACGCGGCG CTGATGTTCC CCGGCGATCC GACCAAGGCC
CGCAACGCTC CCTATCAGTT CGGCTATCGC GCGCCGCGCG ACGGCTATGT CCCGACCGAC
GCCGCGCAAT TGCCCGACGG GCGACTCGTC ATCCTCCACC GGCGCTTCGG GCTGCTCGAC
GGCTTCTCCG CGATCGTGGG CATCGCCGAC CCGGCGCGAA TCGCCCCCGG CGCGACGCTG
ACCAGTGAGC TGGTCGCCGA GCTGAAGCCG CCGCTCACCG TCGACAATAT GGAGGGAATC
GCGGCCACCC GCGATGGCGA CCGCACCATC CTGTGGATCA TCTCCGACGA CAACCGGGTG
CCGATCGAGC GGACGTTGCT GTTGAAGTTT GAATTGTAG
 
Protein sequence
MLNAPVGRRS ASRGTRPGRA IGGKAFGNRP SGGIGGGMRK LLAALLFCLV PGSAGFPQAE 
VKVVATPVPL DPDDPARTTV GRLRYLGGWQ LTSRQRDFGG YSALSVQGDR FLALSDTGHY
LRFRIAAPGV VSDSRFGELP AFPGYEGRKG DRDSESMTIG PEGDVWVGFE YHNAILRYSP
DLTLLQSIAF PPAMKDWSRN SGPEAMVRLA GGRFVVFAEG RAIAPHVHAA LMFPGDPTKA
RNAPYQFGYR APRDGYVPTD AAQLPDGRLV ILHRRFGLLD GFSAIVGIAD PARIAPGATL
TSELVAELKP PLTVDNMEGI AATRDGDRTI LWIISDDNRV PIERTLLLKF EL