| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2322 |
|---|
| Symbol | |
|---|
| ID | 5197552 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 2582819 |
|---|
| End bp | 2583487 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640581868 |
|---|
| Product | OmpA/MotB domain-containing protein |
|---|
| Protein accession | YP_001262819 |
|---|
| Protein GI | 148555237 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0351877 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACAAGA CGAAGATGCT GGTGGCGATG TTCGCCGCCT CGACCCTGCT GGCCGGGTGC
GTCACCGATC CGGACACCGG CCAGCGCCGC CTGTCGAAGG CCGGGATCGG CGCGATCGCG
GGGACCGCGC TGGGCGCCGG CGCCGGCGCG CTGGTCGGGG GCCGGCACAA CCGGACCGAG
GCGATCGTCG GCGCCGGGAT CGGCGCGCTC GCCGGTGGCG CGATCGGCGT CTATATGGAT
CGCCAGGAGG CCAAGCTGCG CGAGCAGACC GCCGGCACCG GCGTCGAGGT CGAACGGCAG
GGCGACGAGC TGCTGCTCAA CATGCCGGCC GGCATCACCT TCGCGACCAA CAGCTACGAG
GTGCAGCCGC AGTTCCGCAC CACGCTCGAC AAGGTGGCGT CGACGCTGTC CGAATATGGC
AAGACCTATG TCGACGTGTA CGGCCACACC GATTCGACCG GCAGCGACGC GATCAACGAG
CCGCTGTCGC GCAACCGGGC CGAAGCGGTC GCCAACTATC TGTCGGGCCA CGGCGTCGCC
GCCGCGCGGA TCGGCACGCA GGGCTTCGGA TCGCGCCAGC CGGTCGCCTC GAACGCGACC
CCCGATGGAC GCCAGGCCAA TCGCCGGGTC GAGATCAAGA TCGTGCCGAT CAAGGAAGGC
GATATCTGA
|
|---|
| Protein sequence | MHKTKMLVAM FAASTLLAGC VTDPDTGQRR LSKAGIGAIA GTALGAGAGA LVGGRHNRTE
AIVGAGIGAL AGGAIGVYMD RQEAKLREQT AGTGVEVERQ GDELLLNMPA GITFATNSYE
VQPQFRTTLD KVASTLSEYG KTYVDVYGHT DSTGSDAINE PLSRNRAEAV ANYLSGHGVA
AARIGTQGFG SRQPVASNAT PDGRQANRRV EIKIVPIKEG DI
|
|---|
| |