| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2318 |
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| Symbol | |
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| ID | 5199783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2578498 |
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| End bp | 2579760 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640581864 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001262815 |
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| Protein GI | 148555233 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0453774 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGATC GCGGCGCGCG GCGGCCAGAT GCGGGGATGA CCCAGCCAGC CACCCTCGCG
CCGGTCCTGT CCGGCTTGCG CGTCCTCGAG ATCGGCCATT TCGTCGCCGC GCCCTTCTGC
ACGCGGCTGC TGGCGGACCT GGGCGCCGAC GTCGTCAAGA TCGAGCCGCG CGGCGGCGAT
CCCGTCCGGC AATGGGGCGA GATGATCGAC GGCCGCTCGC TATGGTGGTC GATGCACGGC
CGCAACAAGC GCAGCGTCAC GGTCGACCTC AAGTCGGACA AGGGCCGCGC GCTGATCCTG
CGGCTGGTCG CCGAGTGCGA TGTCGTCGTC GAGAATTTCC GCCCCGGCCA GCTTCGGAAG
ATGGGGCTCG GGTCCGAGGT GCTGCGCGGG GTGCGCCCCG ACCTCATCGT CGCACATGTC
TCGGGCTATG GGCAGGACGG GCCGGGCGCG AACCGCGCGG CGTTCGGCGT GATCGGCGAG
GCGATCGGCG GCCTGCGCTA CCTGACCAAC CAGGCGCCCG GCACGGCCGA CCTGCCGCCG
GTGCGCGTCG GCGTCAGCAT CGGCGATTCG ATCGCCGGCC TCTATGCGGC CTTCGGGGTG
ATGGCGGCGC TGTGGCAGCG CGACCGCGCC GGCGGCGACG GGCGGGCGCG CACGATCGAC
GTCGCGCTGA CCGAAAGCGT GCTCAGCATG ATGGAGGGGA TGCTCCCCGA ATATGGCGCG
CTCGGCAAGA TCAAGCAGCC GGCCGGCGGC GGTATCGCGA CCGCGGCGCC GACCAACGCC
TATCCCACCG CCGACGGCCA ATGGGTGCTG ATCGCCGCCA ATTCGGAGCC GCTGTTCGCC
AAGCTGATGA CGCTGGTCGG CCATGGAGAG CTGATCGGCG CGCCCGGCTA TGCGAGCAAT
CCCGAGCGGG TCGCCAATGT CGACACGCTC GACCAGCTGA TCGGCGCCTG GACCCGGACG
CTGTCCGCCG GGGAACTGGT CGCCCGGCTC GACGCGAGCG ACATCCCCAA CAGCAAGGCC
TACACCGCCG CCGACTGCGC CGCCGATCCG CAATATCGCG CGCGCGGCAT GGTCCGCGAG
GTGCCCGACA AGCATTTCGG GACGGTGCTC CAGGCCGGCA TGGTGCCGCA CGTCCCCGAA
TCGCCGGGCA CGGTGCGCTG GGCCGGCCCC GACCTGGGCG AGCATACCGA CGAGGTGCTC
GGCGAACTGC TGGGCCTCGC CCCGGCCGAG ATCGATGCAT TGAAGCAGGA GGGCGTGCTG
TGA
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| Protein sequence | MDDRGARRPD AGMTQPATLA PVLSGLRVLE IGHFVAAPFC TRLLADLGAD VVKIEPRGGD
PVRQWGEMID GRSLWWSMHG RNKRSVTVDL KSDKGRALIL RLVAECDVVV ENFRPGQLRK
MGLGSEVLRG VRPDLIVAHV SGYGQDGPGA NRAAFGVIGE AIGGLRYLTN QAPGTADLPP
VRVGVSIGDS IAGLYAAFGV MAALWQRDRA GGDGRARTID VALTESVLSM MEGMLPEYGA
LGKIKQPAGG GIATAAPTNA YPTADGQWVL IAANSEPLFA KLMTLVGHGE LIGAPGYASN
PERVANVDTL DQLIGAWTRT LSAGELVARL DASDIPNSKA YTAADCAADP QYRARGMVRE
VPDKHFGTVL QAGMVPHVPE SPGTVRWAGP DLGEHTDEVL GELLGLAPAE IDALKQEGVL
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