| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2316 |
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| Symbol | |
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| ID | 5200137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2576139 |
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| End bp | 2577581 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640581862 |
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| Product | 3-isopropylmalate dehydratase, large subunit |
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| Protein accession | YP_001262813 |
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| Protein GI | 148555231 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0965913 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGCG CGGCGTCGCG GCCGCGGCTG CTGTTCCAGA AGGTCTGGGA CGCGCATGTC
GTCGCCGACA TCGGCGACGG CGCAGTGCTG CTCTATATCG ACCGCCACCT GGTCAACGAG
GTGACGAGCC CGCAGGCGTT CGAGGGGCTG CGCCTTGCCG GCCGCAAGGT GCGCCGGCCC
GGCGGCACGA TCGCGGTCGC CGACCATAAT GTCCCGACCG ACGACCGTTC GGGCGGCGTC
GCCGCGATCG CCGAGCCCGA GAGCCGGCTT CAGGTCGAGG CGCTCGAACG CAATGTCGCC
GAATTCGGCG TCCCCTATGT GCCGCTGCGC AGCCGCCGGC AGGGGATCGT CCACATCATC
GGGCCGGAGC TGGGCCTGAC CCTGCCCGGC ACCACCATCG TCTGCGGCGA CAGCCACACC
TCGACCCATG GCGCGTTCGG CGCGCTCGCC TTCGGCATCG GCACGTCGGA GGCGGAGCAT
GTCCTCGCCA CCCAGACGCT GATCCAGCGG CCGGCGAAGG CGATGCTGAT CCGGGTCGAC
AACCGGCTCG GCGCCGGGGT GACCGCCAAG GACCTGATCC TCCACATCAT CGGCCGGATC
GGGACGGGCG GGGCGACCGG CCATGTCATC GAATATGCCG GCGAGGCGGT GACGGCGCTC
GACATGGCGG GGCGGATGAC CCTGTGCAAC ATGTCGATCG AGGCGGGCGC CCGCGCCGGC
ATGATCGCGC CCGACGAGAC GGTCTATGCC TGGCTCGCGA ACGCGCCGCA CGCGCCGAAG
GGCGCGGCGT TCGAACGGGC GCGGGCCTAT TGGGACACGC TGCGCTCCGA CGAGGGCGCC
GACTATGACC GCACCGTCGT GATCGACGCG CGCGAGGTCG CGCCGATGGT GAGTTGGGGC
ACCAGCCCCG AGGCGGTGAC GACGATCGAC GGCGCGGTCC CCGATCCGGC GGCGATCGCC
GATGAGGCGC AGCGCGGCCA GACGCAGGCG ATGCTCGACT ATATGGGGCT GCGGCCCGGC
GCGCCGATCG CCGGCACGCC GATCGACATG GCGTTCATCG GAAGCTGCAC CAACGGCCGG
ATCGAGGACC TCCGCGCGGC GGCGGCGATG ATCGGCGGAC GCCGCGTCGC GCCGGGCGTC
CGCGCGCTGG TCGTGCCCGG CTCGGGCCAG GTCAAGGCGG CGGCCGAGGC CGAGGGGCTC
GACCGGCTGT TCCTCGACGC CGGCTTCGAA TGGCGCGAGG CGGGCTGCTC GATGTGCCTC
GGCATGAACC CCGACCAGCT CGGGCCGGGG CAGCGCTGCG CCTCGACCTC GAACCGCAAT
TTCGAGGGGC GGCAGGGGCC GGGCGGGCGC ACCCACCTGA TGTCCCCCGC CATGGCCGCC
GCTGCGGCGC TGGCCGGCCA TATCGTCGAT CCGCGCCATA TCGCCAATCC GCAAAGGCCC
TGA
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| Protein sequence | MTGAASRPRL LFQKVWDAHV VADIGDGAVL LYIDRHLVNE VTSPQAFEGL RLAGRKVRRP
GGTIAVADHN VPTDDRSGGV AAIAEPESRL QVEALERNVA EFGVPYVPLR SRRQGIVHII
GPELGLTLPG TTIVCGDSHT STHGAFGALA FGIGTSEAEH VLATQTLIQR PAKAMLIRVD
NRLGAGVTAK DLILHIIGRI GTGGATGHVI EYAGEAVTAL DMAGRMTLCN MSIEAGARAG
MIAPDETVYA WLANAPHAPK GAAFERARAY WDTLRSDEGA DYDRTVVIDA REVAPMVSWG
TSPEAVTTID GAVPDPAAIA DEAQRGQTQA MLDYMGLRPG APIAGTPIDM AFIGSCTNGR
IEDLRAAAAM IGGRRVAPGV RALVVPGSGQ VKAAAEAEGL DRLFLDAGFE WREAGCSMCL
GMNPDQLGPG QRCASTSNRN FEGRQGPGGR THLMSPAMAA AAALAGHIVD PRHIANPQRP
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