| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2306 |
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| Symbol | |
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| ID | 5200172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2566239 |
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| End bp | 2567027 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640581852 |
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| Product | gluconate 5-dehydrogenase |
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| Protein accession | YP_001262803 |
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| Protein GI | 148555221 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00833457 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACAAGC CGATCGATCC GACCCGGCTG TTCGACCTGT CGGGGCGGGT CGCGATCGTC
ACCGGCGGGT CGCGCGGGCT GGGGCTGCAG ATCGCCCGCG CGCTGGGCGC GAACGGTGCC
CGGCTGGCGC TGGCCGCGCG CAAGCAGGCC GAGCTCGACG AAGCGGTGGC CGAGCTCGCG
GCGGACGGCA TCGAGGCCGT CGCCTTCACC GCCGACCTGG CCGACGGCGC GGCGCCGGCG
GCGCTCGCCC GCCAGGTGAT CGAGCGGTTC GGCCGGATCG ACATCCTCGT CAACAATGCC
GGCGCCACCT GGGGCGCGCC CGCCGAGGAC TATCCCGCCG ACGCCTGGGC CCGGGTGATC
GACGTCAGCC TGAGCAGCGT CTTCCTGCTC AGCCAGGCGG TGGCGAAGGC CGCCTTCCTG
CCGCAGGGCG GCGGCGCGAT CGTCAATGTT GCCTCGGTCG AGGGGCTGCT CGGCCATCAT
CATCGCCGGC CCGGAACGGT CGCCTACAAC GCGGCCAAGG GCGGGGTCGT CAACATGACC
CGCGCGCTCG CCGCCGAATG GGGCCGCCGC AACATCCGCG TCAACACGAT CGCGCCCGGC
TATTTCCCGT CGAAGATGAC CGGCAAGATC CTCGCCGACC ATGGCGCCGA ACTGATCGAC
CAGACCCCGC TCGGCCGGCT CGGCGGCCCC GGCGACCTGA TGGGGCCGGC GCTGCTGCTC
GCCTCCGACG CCGGGCGGCA CATCACCGGC CAGACGATCG CCGTTGACGG CGGCGCCAGC
ATCATCTGA
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| Protein sequence | MDKPIDPTRL FDLSGRVAIV TGGSRGLGLQ IARALGANGA RLALAARKQA ELDEAVAELA
ADGIEAVAFT ADLADGAAPA ALARQVIERF GRIDILVNNA GATWGAPAED YPADAWARVI
DVSLSSVFLL SQAVAKAAFL PQGGGAIVNV ASVEGLLGHH HRRPGTVAYN AAKGGVVNMT
RALAAEWGRR NIRVNTIAPG YFPSKMTGKI LADHGAELID QTPLGRLGGP GDLMGPALLL
ASDAGRHITG QTIAVDGGAS II
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