Gene Swit_2304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2304 
Symbol 
ID5200170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2563996 
End bp2564925 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content68% 
IMG OID640581850 
Producthypothetical protein 
Protein accessionYP_001262801 
Protein GI148555219 
COG category[S] Function unknown 
COG ID[COG3246] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000284141 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGAAAGG TGATCGTGAC CTGTGCCGTC ACGGGGGCGG TGCACACGCC GTCGATGTCC 
CCCCATCTGC CGAAGACGCC CGACGAGATC GCCGCCGCGG CGATCGAGGC GGCGGCGGCG
GGGGCTTCGG TGGTCCATCT CCACGCGCGC GATCCCGAAA ATGGCAAGCC GAGCCAGGAC
CCGGCGCTGT TTCGGCGCTT CCTGCCCCAG ATCGCCGAGG CTTGCGACGT CGTCATCAAC
ATCACCACCG GCGGCGCGCC GACGATGGGG ATCGAGGAGC GTCTCCAGCC CGCGCTCACC
TTCCAGCCCG AGATCGCCTC GCTCAACATG GGGACAATGA ACTTCGGCCT CTACGAGATG
CTCGGCCGCT TCCGCGAGTT CCGCTACGAC TGGGAGGAAC CCTATCTGCG CAACAGCGAC
GCGAACATCT TCCGCAACAC CTTCCGCGAC ATCGAGCATA TCCTGAAGAG CTGCGGCGCC
AACGGCACCC GCTTCGAGAT CGAGTGCTAC GACGTCGCCC ATCTCTACAC CGCCGCGCAT
TTCCGCGATC GCGGGCTGCT CGAAGGGCCG CTGTTCATCC AGACCGTGTT CGGCATCCGC
GGCGGCATCG GCGTCCATTA CGAGGACATC GCGATGATGA AGCGCACCGC CGACCGGCTG
TTCGGCGACG ACTATGTCTG GTCGGTGCTC GGCGGCGGCC GCCACCAGAT GCCGATCGCG
ACGATGTCGG CGGCGATGGG CGGCAATGTC CGCGTCGGGC TGGAGGACAG CCTGTGGGGC
GCCCCCGGCC AGCTCGCGAC CAGCAATGCC GAGCAGGTGC GCCGCATCCG CACCGTGCTC
GAGGCGCTTT CGCTCGAGGT CGCGACCCCC GACGAGGCGC GCGCCATGCT CAAGCTCAAG
GACCGCGCGT CGGTGAAGGT GTCGGCATGA
 
Protein sequence
MRKVIVTCAV TGAVHTPSMS PHLPKTPDEI AAAAIEAAAA GASVVHLHAR DPENGKPSQD 
PALFRRFLPQ IAEACDVVIN ITTGGAPTMG IEERLQPALT FQPEIASLNM GTMNFGLYEM
LGRFREFRYD WEEPYLRNSD ANIFRNTFRD IEHILKSCGA NGTRFEIECY DVAHLYTAAH
FRDRGLLEGP LFIQTVFGIR GGIGVHYEDI AMMKRTADRL FGDDYVWSVL GGGRHQMPIA
TMSAAMGGNV RVGLEDSLWG APGQLATSNA EQVRRIRTVL EALSLEVATP DEARAMLKLK
DRASVKVSA