Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2304 |
Symbol | |
ID | 5200170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 2563996 |
End bp | 2564925 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640581850 |
Product | hypothetical protein |
Protein accession | YP_001262801 |
Protein GI | 148555219 |
COG category | [S] Function unknown |
COG ID | [COG3246] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000284141 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGAAAGG TGATCGTGAC CTGTGCCGTC ACGGGGGCGG TGCACACGCC GTCGATGTCC CCCCATCTGC CGAAGACGCC CGACGAGATC GCCGCCGCGG CGATCGAGGC GGCGGCGGCG GGGGCTTCGG TGGTCCATCT CCACGCGCGC GATCCCGAAA ATGGCAAGCC GAGCCAGGAC CCGGCGCTGT TTCGGCGCTT CCTGCCCCAG ATCGCCGAGG CTTGCGACGT CGTCATCAAC ATCACCACCG GCGGCGCGCC GACGATGGGG ATCGAGGAGC GTCTCCAGCC CGCGCTCACC TTCCAGCCCG AGATCGCCTC GCTCAACATG GGGACAATGA ACTTCGGCCT CTACGAGATG CTCGGCCGCT TCCGCGAGTT CCGCTACGAC TGGGAGGAAC CCTATCTGCG CAACAGCGAC GCGAACATCT TCCGCAACAC CTTCCGCGAC ATCGAGCATA TCCTGAAGAG CTGCGGCGCC AACGGCACCC GCTTCGAGAT CGAGTGCTAC GACGTCGCCC ATCTCTACAC CGCCGCGCAT TTCCGCGATC GCGGGCTGCT CGAAGGGCCG CTGTTCATCC AGACCGTGTT CGGCATCCGC GGCGGCATCG GCGTCCATTA CGAGGACATC GCGATGATGA AGCGCACCGC CGACCGGCTG TTCGGCGACG ACTATGTCTG GTCGGTGCTC GGCGGCGGCC GCCACCAGAT GCCGATCGCG ACGATGTCGG CGGCGATGGG CGGCAATGTC CGCGTCGGGC TGGAGGACAG CCTGTGGGGC GCCCCCGGCC AGCTCGCGAC CAGCAATGCC GAGCAGGTGC GCCGCATCCG CACCGTGCTC GAGGCGCTTT CGCTCGAGGT CGCGACCCCC GACGAGGCGC GCGCCATGCT CAAGCTCAAG GACCGCGCGT CGGTGAAGGT GTCGGCATGA
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Protein sequence | MRKVIVTCAV TGAVHTPSMS PHLPKTPDEI AAAAIEAAAA GASVVHLHAR DPENGKPSQD PALFRRFLPQ IAEACDVVIN ITTGGAPTMG IEERLQPALT FQPEIASLNM GTMNFGLYEM LGRFREFRYD WEEPYLRNSD ANIFRNTFRD IEHILKSCGA NGTRFEIECY DVAHLYTAAH FRDRGLLEGP LFIQTVFGIR GGIGVHYEDI AMMKRTADRL FGDDYVWSVL GGGRHQMPIA TMSAAMGGNV RVGLEDSLWG APGQLATSNA EQVRRIRTVL EALSLEVATP DEARAMLKLK DRASVKVSA
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