Gene Swit_2296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2296 
Symbol 
ID5199241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2552457 
End bp2552882 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content70% 
IMG OID640581842 
Producthypothetical protein 
Protein accessionYP_001262793 
Protein GI148555211 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.168074 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00236318 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATTTGG AGAAGCGCGC CGTCGCCGCC GATTTGCTGC ATGAATTCTG CTGGCGGGCG 
GACATGGGGA TGGGGGACCG CATCGCCGAG CTGTTCACCG ACGACGCCAC CGTCGACGCC
CCCCATTTCC AGCTCGCCGG CCGGGCCGAG ATCCACGACT GGTTCAGCGC CCGCGCGAAA
CCCGGCGAGC GCAAGGTGCG GCACATCCTG TCGAACCTGC GCTTCGACGA GCGCGCCGAC
GGGACGATGG GCGTCACCGC CTACGCCATG GTCACGATGC TGCTGCCGAC CGGCGAGGCC
GCGAAGGTCG CGGTCGGCAC CTCGACCGAC GAGCTGCGCT TCGACGGGCA GCGCGCCCTG
TTCGCCGCCC GCCGGCTCGA CATCGCCTTC GAGGGTCGCT TCGCGGTCGA GGGAGGCGCG
GCATGA
 
Protein sequence
MDLEKRAVAA DLLHEFCWRA DMGMGDRIAE LFTDDATVDA PHFQLAGRAE IHDWFSARAK 
PGERKVRHIL SNLRFDERAD GTMGVTAYAM VTMLLPTGEA AKVAVGTSTD ELRFDGQRAL
FAARRLDIAF EGRFAVEGGA A