| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2295 |
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| Symbol | |
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| ID | 5199240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2551564 |
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| End bp | 2552460 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640581841 |
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| Product | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase |
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| Protein accession | YP_001262792 |
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| Protein GI | 148555210 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.143026 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00277815 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGCTCG CGACGATCGC GCTCGACGGC GCGGCGGTGC CGGCGCTCGT CCGTGATGGA
GCCGCCTTCC CCTTCGCCTC GCTGGCGCCG GACCTGCCGG CCTCGATCGA GGCGCTGCTC
GCCGGCGGCG ACGCGGCGAT GGCCCGTCTC CGTCGCGCCG CTGACAGGGC GGGCGAGGCT
ATCCCCCTCG ACCAGGCCCG GCTGCTCGCC CCGCTGACCC GGCCGTCCAA GCTGCTCGGT
ATCGGCTTCA ACTATTCGAG CCATGTCGAG GAGGTTCGCG CCAAGGGCAT TCCGATCCCC
GACCTCTCCA ACCAGATCTG GTTCAACAAG CAGGTCAGCG CGATCGCCGG CCCGTTCGAT
CCGATCCACC TGCCCGCCTC GTCCGAGCAG CTCGACTATG AATGCGAGCT GGGCATCGTC
ATCGGCCGGC GCTGCCGCCA TGTCGCGGCG GCCGACGCGC GCAAGGTGAT CGCCGGCTAT
CTGGTCGCCA ACGACGTCAG CGTCCGCGAC TGGCAGCTCA AGGCGCCGAC CGCGACGCTC
GGCAAGTCGT TCGACACCCA CGCGCCGATC GGTCCCTGGA TCACCACCGC CGACGAGGTC
GCCACCCCGG ACGATCTCGC GATCCGGACG CTGGTCGACG GGACGGTGGT GCAGGACGGC
CGGACCAGCG AGCTGGTCAA CGGCATCGAC GCGATGATCG CCTATCTGAC CCAGGTGATG
ACGCTCGAGC CCGGCGACAT ATTGCTCACC GGCACGCCGA GCGGCGTCGC GGCGGGCCGC
AACCCGCCGG CCTGGCTGCG CGAGGGGCAG GTCGTCCGCG TCGAGATCGA GGGGCTCGGC
CATATCGAGA ACCGGGTGGT GGCCGAACCG CTCGACCAGA CGAGCTTCAT CCAATGA
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| Protein sequence | MKLATIALDG AAVPALVRDG AAFPFASLAP DLPASIEALL AGGDAAMARL RRAADRAGEA
IPLDQARLLA PLTRPSKLLG IGFNYSSHVE EVRAKGIPIP DLSNQIWFNK QVSAIAGPFD
PIHLPASSEQ LDYECELGIV IGRRCRHVAA ADARKVIAGY LVANDVSVRD WQLKAPTATL
GKSFDTHAPI GPWITTADEV ATPDDLAIRT LVDGTVVQDG RTSELVNGID AMIAYLTQVM
TLEPGDILLT GTPSGVAAGR NPPAWLREGQ VVRVEIEGLG HIENRVVAEP LDQTSFIQ
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