| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2285 |
|---|
| Symbol | |
|---|
| ID | 5196850 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 2539835 |
|---|
| End bp | 2540938 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640581831 |
|---|
| Product | vanillate monooxygenase |
|---|
| Protein accession | YP_001262782 |
|---|
| Protein GI | 148555200 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.138524 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTTACC TACGCAATGC CTGGTATGTG GCGGCCTGGT CGGACGAGGT TTCCGACAAT
CTGCTGACCC GCAGGATCCT GAACGAGCAG GTGCTGCTCT ATCGGACCGA GGCGGGCGAG
CTCGTCGCCA CCGCCAACAC CTGCCCGCAC CGCTTCGCGC CGCTGCACCT GGGCAAGGTC
GTCGGCGACG CGATCGAGTG CCCCTATCAC GGCCTGCGCT TCAACGGCGA AGGCCGCTGC
GTCTTCAACC CCGATGGCGA CGGCCGCATC CCCGCCGGCG CGCGCCTGCG CACCTATCCG
ATCACCGAGC GGCTCGGCGC CGCCTGGATC TGGATGGGCG ATCCGGCGCG GGCCGACCTG
GCGATGATCC CCGACTTCGA GTTCCTCGAG GACCCGAGCT ACCGGACGGT CAAGGGCGTG
CTCCACGTCC GCGCCAATTA TCGCTACATC AACGACAATC TGATGGACGA GGCGCACCTC
CACATGGTCC ATCACAATTC GCTGGCCTGC GACATGGTGC GCCGCGCGAA GACCGAGCTG
GTCAAGGACG AGGGCGGCAC GATCTGGGCC AATCGCTACG GCCGTGACGG CGCGCCGCCC
GCCATCTTCG ACATGATGTG GCGGATGACC CGCGGCGATT ATGAAGGGAC GATGGACCAT
TGGGTCGAGG GTGGCTGGAA GGCGCCCTGC TTCGTCCGCA ACAACACCGG CGTCGTGCTG
CACGGCCGCC CGCGCGACGA GGGGCTGGAG ACCAAGAACG CCCATCTGCT GACGCCGGAG
ACCGACACGA CCACCCATTA TTTCTGGGCG ATCTGCCGCA ATTTCCGGAC CGATGACGCC
GAACTCGACC AGGGCATCCG CACCGGCACC GAATATGCCT TCGTCCATGA GGACGAGGTG
ATGCTCAACG CCGTCCAGGA AGCGATGGGC GATCGCGAAT TCTGGTCGAT GAAGCCCGCG
CTGCTGCAGG CCGACATCGG CGCGGTCGAG CTGCGCCGCA CGCTCGACCG GATGATCGCC
GCCGAACAGG CCGAACAGGC CGAACAGCAG GCCGGACAGG CCGATCGGCC GCAGCCCGCG
CGCAGCGCGG AAGCGGTCGG CTGA
|
|---|
| Protein sequence | MVYLRNAWYV AAWSDEVSDN LLTRRILNEQ VLLYRTEAGE LVATANTCPH RFAPLHLGKV
VGDAIECPYH GLRFNGEGRC VFNPDGDGRI PAGARLRTYP ITERLGAAWI WMGDPARADL
AMIPDFEFLE DPSYRTVKGV LHVRANYRYI NDNLMDEAHL HMVHHNSLAC DMVRRAKTEL
VKDEGGTIWA NRYGRDGAPP AIFDMMWRMT RGDYEGTMDH WVEGGWKAPC FVRNNTGVVL
HGRPRDEGLE TKNAHLLTPE TDTTTHYFWA ICRNFRTDDA ELDQGIRTGT EYAFVHEDEV
MLNAVQEAMG DREFWSMKPA LLQADIGAVE LRRTLDRMIA AEQAEQAEQQ AGQADRPQPA
RSAEAVG
|
|---|
| |