Gene Swit_2281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2281 
Symbol 
ID5196488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2536776 
End bp2537150 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content70% 
IMG OID640581827 
ProductHxlR family transcriptional regulator 
Protein accessionYP_001262778 
Protein GI148555196 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.134727 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATGA CCTCCTCCGT CCTGGCGCAT GGCGAATGCA TGCGGGTCAG CGGGCTGCTC 
GCGCGGATCG GCGACCGCTG GACCCTGCCC GTCATCGTCA CCCTCCATGA CGGACCGCTG
CGCTTCAACC AGGTCCGCCG CGCGGTCGGC GGCATCTCGC AGCAGATGCT GACCCGCACC
CTCAGGACGC TCGAACGCGA CGGCATGGTC GGGCGGACGG TCCACCCCAC GGTTCCGCCG
CAGGTCGAAT ATGCGCTGAC CCCGCTCGGC CGCTCGCTCG CCGCCGAAGG GTTGCGGCTG
GGCGGCTGGG TGCGCGACCA TATCGCCGAG ATCGACGGCC ATCGCAGCGC CTTCGATCGG
CGCCAGGAGG GCTGA
 
Protein sequence
MDMTSSVLAH GECMRVSGLL ARIGDRWTLP VIVTLHDGPL RFNQVRRAVG GISQQMLTRT 
LRTLERDGMV GRTVHPTVPP QVEYALTPLG RSLAAEGLRL GGWVRDHIAE IDGHRSAFDR
RQEG