| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2280 |
|---|
| Symbol | |
|---|
| ID | 5196487 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 2536140 |
|---|
| End bp | 2536691 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640581826 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001262777 |
|---|
| Protein GI | 148555195 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.137865 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCTTG CCCAGAGGAT CGACCGGATC GAGGCGGAGG CGGCGATACG GCGGCTGGTG
GCGGCCTATT GCTTCACGAT CGACGATCGC GACCTGCCCG CCATCGCCGC CTTGTTCGCC
GCCGACGCGC GGGTCGCGTC GGAGGACGGG GTGATGGAGG CGCGCGGGAT CGACGCGATC
ATGGCGCAAT ATCATAGGCG CTTCGCGGTG CTGGGGCCGG GCGCCCATTA TATGCACGAC
GTGCTGATCG ACGTCGACGA CGCCGATCCC GACCGCGCGA CCGGCCGCGT CTCGGGCCAT
GCCGAGCTGT GGCGCTGCGA CCGGATGATG GTGGCGGCGC TGCGCTATCG CGACGTCTAT
GTCCGCACCC CGGCGGGGTG GCGCTTCGGC GAGCGGGTCA TCGGCTTCCT CTATTATGTC
GACGCCGCCG ACTATCCCGG CATCCTCGGC CATCGCGACC GCAACCGCGC CTATGACACG
CCGCTGCCGG CCGACTTCCC GGAGGCGCTG CCGGGCTGGG CCGCGCCGGC GGAGGGGGCG
GCGCATGGCT GA
|
|---|
| Protein sequence | MDLAQRIDRI EAEAAIRRLV AAYCFTIDDR DLPAIAALFA ADARVASEDG VMEARGIDAI
MAQYHRRFAV LGPGAHYMHD VLIDVDDADP DRATGRVSGH AELWRCDRMM VAALRYRDVY
VRTPAGWRFG ERVIGFLYYV DAADYPGILG HRDRNRAYDT PLPADFPEAL PGWAAPAEGA
AHG
|
|---|
| |