| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2275 |
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| Symbol | |
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| ID | 5199181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2531053 |
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| End bp | 2532258 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640581821 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001262772 |
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| Protein GI | 148555190 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.559073 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGGGC GGTTGCAGGG GCCGCTGGCC GGGGTCCGGG TGATCGACTG CACCAGCGTG
CTGATGGGTC CCTATGCCAC CCAGATCATG GCCGACCTCG GCGCCGACGT GATCAAGGTG
GAGAGCCCCG ACGGCGATAC CACCCGCTAT CTGCCGCCCG GCCCCGACGC GACGCGCGGC
GGCATGTTCC TCAACGTCAA CCGCGGCAAG CGCAGCCTGG CGCTCGACCT CAAGCAGCCC
GAGGCGCGGG CGGCGCTGGT CAGGCTGGTC GAGGGCGCCG ACGTGTTCGT CCACTCGATG
CGGCCCGGCG CGATCCAGCG GCTCGGCCTC GACTATGCGG CGCTCAAGGA CGTCGCGCCG
GGGCTGGTCT ACGCCAATCT CTACGGCTTC GCGCGCAGCG GGCCCTATCG CGACTATCCC
GCCTATGACG ACATCGTCCA GGCGGCGTCG GGGCTGGTCG ATTTGCAGGC GCGGCTGTCG
GGCGGGGAGC CGACCTATCT GGCGACCGTC GTCGCCGACA AGGTGACCGG GCTGACCGGC
CTCTACGCGA TCCTCGCCGC GCTGTTCGCG CGGACCCGCA CCGGCCAGGG CCAGGAGGTC
GAGGTGCCGA TGTTCGAGAC GCTCGTCTCC TTCACGATGA TCGAGCATCT GTGCGGGTCG
CTGTTCGATC CTCCGCAGGG GCCGCCCGAA TATCCGCGCG TCACCGCCGC CGCCCGCCGC
CCCTACCGGA CGAAGGACGG CCATATCGGC GTGATGATCT ACAACGACAA GCATTGGCGC
GCCTTCTTCC ACGCGATCGG CGATCCCGAA TGGACGCGCG ACCCGATATT CGCGTCGATG
CGCAGCCGCA CCCAGAATAT CGGCACGGTG CTGCACAAGC TGGCCGAGGT GATCGAGGAG
CGGACCACCG CCGAATGGAT CGAGCTGTTC CGCCGCGCCG AGGTGCCGGC GATGGCGATC
GCGACGCCGG CCGACCTGCT CCACGACGAG CATCTCGAGG CGACCGGCTT CTGGAACGAG
CGCGACAGCG AGTTCGGCCG GCTGCGCTTT CCCGGCATCC CGACCCGCTT CTCCGCGACA
CCGGGCGCGA TCGGCGATCC GGGGCCCGCG CTGGGCGCCG ACAGCCGCGC GATCCTGGAG
GAGGCGGGGT TCGACGCGGC GACGATCGCC GCGCTGGTCG CCGGCGCCAA CCGGGTGCCG
GCATGA
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| Protein sequence | MSGRLQGPLA GVRVIDCTSV LMGPYATQIM ADLGADVIKV ESPDGDTTRY LPPGPDATRG
GMFLNVNRGK RSLALDLKQP EARAALVRLV EGADVFVHSM RPGAIQRLGL DYAALKDVAP
GLVYANLYGF ARSGPYRDYP AYDDIVQAAS GLVDLQARLS GGEPTYLATV VADKVTGLTG
LYAILAALFA RTRTGQGQEV EVPMFETLVS FTMIEHLCGS LFDPPQGPPE YPRVTAAARR
PYRTKDGHIG VMIYNDKHWR AFFHAIGDPE WTRDPIFASM RSRTQNIGTV LHKLAEVIEE
RTTAEWIELF RRAEVPAMAI ATPADLLHDE HLEATGFWNE RDSEFGRLRF PGIPTRFSAT
PGAIGDPGPA LGADSRAILE EAGFDAATIA ALVAGANRVP A
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