Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2274 |
Symbol | |
ID | 5199180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 2530250 |
End bp | 2530981 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640581820 |
Product | hypothetical protein |
Protein accession | YP_001262771 |
Protein GI | 148555189 |
COG category | [S] Function unknown |
COG ID | [COG3828] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.507054 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGTTC ATCTGGTCGC GGCGGGGAAA TATCATGATA TCGACTTTGC GCGTCTGGAG TTGCTGAAGC TGCTGGCGGA GCTGCCCGAG GCGCGGACCT CGGTGGCGTC GGACTATGGC GATCTCGCCA GCCTCGCGGC GGCCGACCTG CTGATCACCT ATACCTGCGA CCTGCTGCCC GATGCGGCGC AGACCGAGGC GCTGGCGGCG TTCCTGGCGC GCGGCGGCCG CTGGCTGGCG CTGCACGGCA CCAACGCGAC GCTGCGCTTC GGCGCGGACG GGCTGGTCGA CACGCCCGAT GTCGCGCCGG CCTTCACCGG CCTGCTCGGC ACCCGCTTCG CCGGCCACCC GCCGATCGCG CCGTTCAAGG TGTTCGTGAC GCGCGGCGAC CATCAGATGA CCGCCGGCCT GCGCGACTTC CGGGTCGAGG ACGAGCTGTA CCTGACCCAC CGCACCGCCG AGATCGACGT GCTGCTGCAC ACCGGCTTCA CCGGCTCCTG CCCCGAATTC CGCGACTCGG AATGGGACGA GCCCGAGGTG CCCGTGCTCT ATGAACGGCG GGTGGGCGAG GGGGCGATCC TCTACCTCAC CCTCGGCCAT TGCCGGGGCC ATTACGACCT GCGGCCGCTG GCCGATTTCT GGCCGCACCC CCAGCGCTGC TCCTGGAACT ATCCGGTGTT CGCCGAACTG CTCCGCCGCG GCATTCGCTG GGGCCTGCCT CAATCCGGCT GA
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Protein sequence | MKVHLVAAGK YHDIDFARLE LLKLLAELPE ARTSVASDYG DLASLAAADL LITYTCDLLP DAAQTEALAA FLARGGRWLA LHGTNATLRF GADGLVDTPD VAPAFTGLLG TRFAGHPPIA PFKVFVTRGD HQMTAGLRDF RVEDELYLTH RTAEIDVLLH TGFTGSCPEF RDSEWDEPEV PVLYERRVGE GAILYLTLGH CRGHYDLRPL ADFWPHPQRC SWNYPVFAEL LRRGIRWGLP QSG
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