Gene Swit_2274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2274 
Symbol 
ID5199180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2530250 
End bp2530981 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content70% 
IMG OID640581820 
Producthypothetical protein 
Protein accessionYP_001262771 
Protein GI148555189 
COG category[S] Function unknown 
COG ID[COG3828] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.507054 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTTC ATCTGGTCGC GGCGGGGAAA TATCATGATA TCGACTTTGC GCGTCTGGAG 
TTGCTGAAGC TGCTGGCGGA GCTGCCCGAG GCGCGGACCT CGGTGGCGTC GGACTATGGC
GATCTCGCCA GCCTCGCGGC GGCCGACCTG CTGATCACCT ATACCTGCGA CCTGCTGCCC
GATGCGGCGC AGACCGAGGC GCTGGCGGCG TTCCTGGCGC GCGGCGGCCG CTGGCTGGCG
CTGCACGGCA CCAACGCGAC GCTGCGCTTC GGCGCGGACG GGCTGGTCGA CACGCCCGAT
GTCGCGCCGG CCTTCACCGG CCTGCTCGGC ACCCGCTTCG CCGGCCACCC GCCGATCGCG
CCGTTCAAGG TGTTCGTGAC GCGCGGCGAC CATCAGATGA CCGCCGGCCT GCGCGACTTC
CGGGTCGAGG ACGAGCTGTA CCTGACCCAC CGCACCGCCG AGATCGACGT GCTGCTGCAC
ACCGGCTTCA CCGGCTCCTG CCCCGAATTC CGCGACTCGG AATGGGACGA GCCCGAGGTG
CCCGTGCTCT ATGAACGGCG GGTGGGCGAG GGGGCGATCC TCTACCTCAC CCTCGGCCAT
TGCCGGGGCC ATTACGACCT GCGGCCGCTG GCCGATTTCT GGCCGCACCC CCAGCGCTGC
TCCTGGAACT ATCCGGTGTT CGCCGAACTG CTCCGCCGCG GCATTCGCTG GGGCCTGCCT
CAATCCGGCT GA
 
Protein sequence
MKVHLVAAGK YHDIDFARLE LLKLLAELPE ARTSVASDYG DLASLAAADL LITYTCDLLP 
DAAQTEALAA FLARGGRWLA LHGTNATLRF GADGLVDTPD VAPAFTGLLG TRFAGHPPIA
PFKVFVTRGD HQMTAGLRDF RVEDELYLTH RTAEIDVLLH TGFTGSCPEF RDSEWDEPEV
PVLYERRVGE GAILYLTLGH CRGHYDLRPL ADFWPHPQRC SWNYPVFAEL LRRGIRWGLP
QSG