| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2268 |
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| Symbol | |
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| ID | 5199773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2523783 |
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| End bp | 2525189 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640581814 |
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| Product | dehydrogenase catalytic domain-containing protein |
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| Protein accession | YP_001262765 |
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| Protein GI | 148555183 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01349] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGGC TCAAAGCCTT CACCATGCCC AAATGGGGCA TCGAGATGTC GGAAGGCACC
ATCGCCGAAT GGATGGTGGC CGAGAACCAG CCCTTCGCGA AGGGCACGGT GCTGACCCTG
ATCGAGACCG ACAAGATCAC CAACGAGGTC GAGGCCGAGG CCGACGGCCG CTTCGTCCGG
CTGATCGCCG AGGCGGGACA GACCTATCCG GTCGGCGCGC TGCTGGCGGT GCTGTCCGAC
GGCGGCGAGG CCGACCCGGC CGAGATCGAC GCTCTGGTGG CCGGCTTCAA GCCGGTCGAC
GCCGGCTTCG CGCCCGATGG CGACGAGGCG CCCGCCGCAG CCCCCGAACC CGTGGCCCCC
GTAGCCGCCG CATCGGCGAT CCCGGACGGG ATCGCGATCA GCCCGGTCGC GCGCGACAAG
GCGGTCGCGG CGGGGCTCGA CGTCGCCGGC CTGGCGGGCT CGGGCCGCGG CGGCCGGATC
ACCGCGCAGG ACGTCGACCG GGCGATCGCC CCGCCGGCCG CGCCGACGCT GGTCGGCGTG
CTGCCGACGC CGCCGGCGAC GACCGTGTTC GCGACGCCGA TGGCGCGCCG GGTCGCGGCG
ATCCATGCCG TCGCGCTCGA AACCGTCGCC GGCAGCGGCC CGCGCGGCCG CGTCCGCAAG
GCCGACGTGC TCGCGGCGGT GCCGACGCCG GTTCCGGCTC CGGCTCCCGC TCCCGTTGCC
GCGCCAGTCG CTCCCGCGCT GGGCGGGGTC GAGATCGTGG CGATGTCGTC GATGCGCCGC
ACGATCGCGC GCCGGCTGAC CGAGGCGAAG CAGCAGATTC CGCATTTCTA CGTCCGCCGC
CGGGTGCGCG CCGACCGGCT GCTCGCGCTG CGCGCCGCCG TCCAGGGGCA GCGGCCGAGC
GTCAACGACT ATCTGGTCAG GGCCTGCGCG CTGGCGCTGA TGGAGGTGCC GCAGGTCAAC
ATCCAGGTCC ACGGCCAGGA GATCCACCGC TTCGCCGATG CCGACGTCGC GGTCGCGGTG
GCGACCGAGA AGGGGTTGGT GACGCCGATC GTCCGCGCCG CCGACCGGCT GTCGGTCGCG
GAGATCTCGG CGGCGATGGC CAGCCTCGCC CAGCGCGCCC GCGCCGGCAA GCTCAAGCCC
GAGGAGTTCA GTGGCGGCAG CTTCTCACTG TCGAACCTCG GCGGCTTCGG GGTCGAGCAG
TTCGACGCGA TCATCAACCC GCCGCAGGGC GCGATCCTCG CGGTCGGCAC CGCCCGGCCC
GAACCGATCG ACGACGACGG CGCGATCCGC ATCGTCCCGG TGCTGCACCT GTCGCTGTCC
TGCGACCATC GCGCGATCGA CGGCGCCGAC GGTGGCCGCT TCCTGGCGGC GCTGGCCGGG
CTGATCGAGA ATCCAGGGTT GCTGTAG
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| Protein sequence | MARLKAFTMP KWGIEMSEGT IAEWMVAENQ PFAKGTVLTL IETDKITNEV EAEADGRFVR
LIAEAGQTYP VGALLAVLSD GGEADPAEID ALVAGFKPVD AGFAPDGDEA PAAAPEPVAP
VAAASAIPDG IAISPVARDK AVAAGLDVAG LAGSGRGGRI TAQDVDRAIA PPAAPTLVGV
LPTPPATTVF ATPMARRVAA IHAVALETVA GSGPRGRVRK ADVLAAVPTP VPAPAPAPVA
APVAPALGGV EIVAMSSMRR TIARRLTEAK QQIPHFYVRR RVRADRLLAL RAAVQGQRPS
VNDYLVRACA LALMEVPQVN IQVHGQEIHR FADADVAVAV ATEKGLVTPI VRAADRLSVA
EISAAMASLA QRARAGKLKP EEFSGGSFSL SNLGGFGVEQ FDAIINPPQG AILAVGTARP
EPIDDDGAIR IVPVLHLSLS CDHRAIDGAD GGRFLAALAG LIENPGLL
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