| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2259 |
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| Symbol | |
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| ID | 5199843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2513622 |
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| End bp | 2514392 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640581805 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001262756 |
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| Protein GI | 148555174 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.654674 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACACAGG ATCGCGGGCG GGTGGCCGGC AAGGTCGCGC TCGTCACGGG CGGCGGATCG
GGGCTCGGCA AGGCCGATTG CGAGGCGCTG GCGCGCGAGG GGGCGACGGT GGTCGTCACC
GACGTCAGGA TCGAGCCCGC GCTGAAGGTC GCCGACGCGA TCGGCAACGG CGCGCTCGCG
CTGGCGCTCG ACGTCGCGTC GGAGGACCAG TGGATCGCGG TGATCCGGGC GATCGAGGAG
CGGTTCGGCC GGCTCGACAT CCTCGTCAAC AATGCCGGCG TCGTGCTGTC GGCCGATGTC
GAGGGGACCA CGCTCGACCA GTTCCGCTTC GTCAACGCGG TGATGAGCGA GGGCGTGTTC
CTCGGCTGCA AATATGCGAT CCCGCTGATG AACCGCAACG ACGGCGGATC GATCGTCAAC
ATGTCGTCGA CCGGCGCGCT GCTCGGCTAT CCGATCTTCC TCGCCTATTC GGCCGCCAAG
GGCGCGGTGC GATCGATGAC CAAGTCGATC GCGGTGATGT GCCAGGAGAA GGGCTACAAG
ATCCGCTGCA ACTCGATCCA TCCCGGCGCG ATCGAGACGC CGATGGTGCA GGAGGCCGAG
GGCCGCATCG GCCAGGAGCA GGCGGTGCCG AAGGGCGTCC TGCCCGCCGG CGCCAAGGGC
GCGCCCGAGG ACGTCGCGGC GATGGTGGTG TTCCTCGCCT CCGACGAATC GCGCTTCGTG
ACGGGCGCGG AGTTCGTCGT CGACAACGGG GTGACGATCC GGCCGTTCTG A
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| Protein sequence | MTQDRGRVAG KVALVTGGGS GLGKADCEAL AREGATVVVT DVRIEPALKV ADAIGNGALA
LALDVASEDQ WIAVIRAIEE RFGRLDILVN NAGVVLSADV EGTTLDQFRF VNAVMSEGVF
LGCKYAIPLM NRNDGGSIVN MSSTGALLGY PIFLAYSAAK GAVRSMTKSI AVMCQEKGYK
IRCNSIHPGA IETPMVQEAE GRIGQEQAVP KGVLPAGAKG APEDVAAMVV FLASDESRFV
TGAEFVVDNG VTIRPF
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