| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2257 |
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| Symbol | |
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| ID | 5199841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2511664 |
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| End bp | 2512470 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640581803 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001262754 |
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| Protein GI | 148555172 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.606485 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGAAC TGGACGGCAA GGTCGCGGTG GTGATCGGCG CGGCGGGGCG GGGCAACATG
GCGCAGGCGA TCGCGCGGCG ACTCGCGGCC GACGGCGCGC GACTCGTGGT GGCGGGGCGC
GATCCCGAAC CGCTCGCCGA ACTGGCCGAC GAACTGGGCG GTCTCGCCGT CGCGCGGTGC
GACCTGACCA GCGAGGCCGA CCTGGCGCGG CTGGCGTCGT CGGCGGTCGA CCGCTTCGGC
GGGATCGACA TCGCCGTCAA CGCGACCGGC TGGGGCCTGC TCAAGCCGTT CCTCGACACC
AGCAAGGAAG AGATCGAGAA GATCACCGCG CTCCAGTTCA CCGGCGCGAT CCTGTTCTAC
CAGGCGATGC TGCGGGCGAT GCGCGACGGC GGGTCGCTGA TCCAGATATC CTCGGCGACG
GCGACGATCA TGCTGGAGGA TCATGCCGCC TATATGGGCA CCAAGGCGGG CGCCGATCAT
GTCATCCGCT GCATCGCCAA CGAATTCGGC GATCGCGGCA TCCGCGCCAA TTCGGTGGCG
CCGGGCTTCA CCGTCACGCC GATGACCGCC AAGGCCGGCC GCAACCCGGC GGTGATCGGC
GCCTTCGCCA AGGAATATCC GCTCGGCCGG GTGGGGACGA GCGAGGACGT CGCCGAGGCG
GTGGCGTGGC TCGTCTCCGA CGCCTGCTTC ATGACCGGAC AGACCTTGCA GGTGAGCGGC
GGCGTCACCC TGCGCCGCAA CCCGCGCAAC GCCGAGATCG TCGCGGCGGT GCAGGCCGCG
CGCGCCGCGG CGGCGCCCCA GGCGTGA
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| Protein sequence | MAELDGKVAV VIGAAGRGNM AQAIARRLAA DGARLVVAGR DPEPLAELAD ELGGLAVARC
DLTSEADLAR LASSAVDRFG GIDIAVNATG WGLLKPFLDT SKEEIEKITA LQFTGAILFY
QAMLRAMRDG GSLIQISSAT ATIMLEDHAA YMGTKAGADH VIRCIANEFG DRGIRANSVA
PGFTVTPMTA KAGRNPAVIG AFAKEYPLGR VGTSEDVAEA VAWLVSDACF MTGQTLQVSG
GVTLRRNPRN AEIVAAVQAA RAAAAPQA
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