Gene Swit_2255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2255 
Symbol 
ID5200992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2510661 
End bp2511185 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content71% 
IMG OID640581801 
Productmethylmalonyl-CoA epimerase 
Protein accessionYP_001262752 
Protein GI148555170 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.539584 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTCC AGCCCCGCAT CATCCAATAT GCCTGGGTCG TCCCCGACCT GGCCGAGGCC 
GCCCGCCGCT GGCATGCAGC GACGGGAATC GGCCCCTTCC TGGTCAACCG CGACCTCAGG
CTCGACGAGC CGCGCTATCG CGGCGCGCCG AGCACGACCC GCTTCTCGAC CGCCGTCGCC
CAGCATGGCG AGGTGCAGAT CGAGCTGGTC GAGCAGCATG ACGACGGCCC CTCCGCCTAT
CGCGACACGG TGCCGGCGGG GGCGACCGGC TTCCACCATG TCGCCTTCAT CGCGGAGGAC
TTCGCCGCCG ACCTGGCCCA TTATACCGGC CAGGGCTTCG CGGTCGCGGC GGACGGGCTG
TTCGGGCCGA TGCGCTATGC CTATGTCGAC ACCTCGGCGG CGCTCGGCCA CATGATCGAG
ATCGTCGAGG ACAAGCCCGC CATCCGCGCC TTCTTCGCCG CCGTGCGCAA GGCGGCCGAC
CGCTGGGACC GCGACCCCGC CACCCTGCTG CGCGAGCTAG GCTGA
 
Protein sequence
MSFQPRIIQY AWVVPDLAEA ARRWHAATGI GPFLVNRDLR LDEPRYRGAP STTRFSTAVA 
QHGEVQIELV EQHDDGPSAY RDTVPAGATG FHHVAFIAED FAADLAHYTG QGFAVAADGL
FGPMRYAYVD TSAALGHMIE IVEDKPAIRA FFAAVRKAAD RWDRDPATLL RELG