| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2253 |
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| Symbol | |
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| ID | 5200990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2508532 |
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| End bp | 2509752 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640581799 |
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| Product | Rieske (2Fe-2S) domain-containing protein |
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| Protein accession | YP_001262750 |
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| Protein GI | 148555168 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.664872 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.256671 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCCA TCAGCCATGA CAGCGCCGGG CCGGATTATG CCCGTATGGA CTATGAGCGC
GGCCGCAAGG CCGCGCCGGA GGGCTTCCCC AAGCTGCCCG ACATTCCCGG CCGCCGCTAT
GTCGATCCCG ATTTCCTGGC GCTGGAGAAG GAGCGGATGT GGAAGCGGGC CTGGCTCTAT
GCCGGCCATG TCGACCAGCT CCCCGACCCC GGCTCCTGGT TCCTGACCCG CAACACCGGA
TCGCCGGTCA TCGTCGTGCG CGACCTGCAG GGCGACCTGC GCGCCTTCTT CAACACCTGC
CAGCATCGCG GCGCGCCGCT GGTGACGGCG GAGGCGGGCG AGGCGCGCGG CTTCGTCTGC
GGCTATCATG GCTGGAGCTA CACGCTCGAC GGCAAGCTCA CCGCCGTCCG CGACAAGCGC
GACTTCGTCG ACCTCGACTT TTCCTGCCGG TCGCTGGTGC CGGTCCGCTG CGAGACGCTG
GGCAACCTGA TCTTCGTCAA CGAGGATGCC GAGGCGCAGC CGCTGATCGA CCATATCGGC
CCGATGGCGA AGGAACTCGA CCAGTATCAG CTCGACCGCC TCCGCCTCGT CGACAGCCGC
AGCTACGAGG TCGGCTGCAA CGTCAAGGTG CTGCTCGACG CCTTTCTGGA GGTCTATCAC
ATCAAGTCGA TCCACCAGCA CACGGTGGAC CGCTTCCTCG ACCATCGCGG CATGATCGTG
ACGCTCTGGC CGAACGGGCA CAGCCGGATG GTGACGCCGA ACAGCCGCCC CGACTGGAAG
GACCCGGGCA CGATCGGCAT GCCGAAGATC GACACCGTCA CCGACCTGCC AGCCAACAAC
AACGTCAGCT ACCAGATCTA TCCGAACTTC GTGATGCCGC CGTCCGACAG CGGTATCCCG
CTGCTCCAGT TCTGGCCGAC CGGCCCGCGC TCGTCGCGGG TGGTGTCGAG CTGGATCGGG
CCCGACCACG ACCCGGAGAA CCCGCATCCG ATGTGGGCGA AGCGGATCGC CAATTGGGAA
CGCATCCTCT ACGAGGACCT CCAGTTCGCC CCGCAGATCC AGGAATCGCT CGAAAGCGAC
GGATTCCGCG GCATGCCGCT CAACTATCAG GAGCGGCGCA TCTATCATTG GCACGAGGAA
CTCGATCGCC GCATCGGCCT CAACCAGGTG CCGCCCGAGG CGCGGGTCGA GCAGGTGCTG
CACGACTGGG TCACGCGCTG A
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| Protein sequence | MDAISHDSAG PDYARMDYER GRKAAPEGFP KLPDIPGRRY VDPDFLALEK ERMWKRAWLY
AGHVDQLPDP GSWFLTRNTG SPVIVVRDLQ GDLRAFFNTC QHRGAPLVTA EAGEARGFVC
GYHGWSYTLD GKLTAVRDKR DFVDLDFSCR SLVPVRCETL GNLIFVNEDA EAQPLIDHIG
PMAKELDQYQ LDRLRLVDSR SYEVGCNVKV LLDAFLEVYH IKSIHQHTVD RFLDHRGMIV
TLWPNGHSRM VTPNSRPDWK DPGTIGMPKI DTVTDLPANN NVSYQIYPNF VMPPSDSGIP
LLQFWPTGPR SSRVVSSWIG PDHDPENPHP MWAKRIANWE RILYEDLQFA PQIQESLESD
GFRGMPLNYQ ERRIYHWHEE LDRRIGLNQV PPEARVEQVL HDWVTR
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