| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2248 |
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| Symbol | |
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| ID | 5200955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2505015 |
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| End bp | 2505908 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640581794 |
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| Product | palmitoyl-CoA hydrolase |
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| Protein accession | YP_001262745 |
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| Protein GI | 148555163 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1946] Acyl-CoA thioesterase |
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| TIGRFAM ID | [TIGR00189] acyl-CoA thioesterase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.745414 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.384843 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCAAGGG ACATGCCGAA ACGGGAGTCA TTTGTGGACG AGACCGATCA TCGCTTTGCC
CATCTGTTCC GGTTCGAGGA AGGCGACGGC GGCGTGCTCC GCGCCGCGCC GACCGGCGGG
CCGCTGTTCC GGCTGTTCGG CGGGCAGGTG CTGGCGCAGG CGCTGGCGGC GGCGCAGCAC
AGCGTCGCGG CGGGGCGGCT GGCGCATAGC TGCCACGCCT ATTTCGTGCG CGCCGGCCGG
GTCGACCGGC CGATCGACTT CACCGTCAGC CGCGACACCG ACGGCCGCAG CTTCTCCGCC
CGCCGGGTCG AGGCGCGGCA GGGCGACGAG CTGATCCTCA CCCTGTCCGC CTCCTTCCAC
GCGGCCGAGC CGGGTCCGGT GCAGCAGGCG ACGATGCCCG ACGTCCCCGA CCCGCTCGAC
CTGCCGCCGC AGGAGCAGGC GATCGCCGCC GCGCTGCCCC ATATGCCGCC GCATCGGCTC
GTCTTCTGGG ATCGCGACAT CGGCCTCGAC GTCCGCGCGG TCGAGCCGTT CCACACGGTC
GACCCGCCCC GCGCGCCGGC GCGCCGCTCC TTCTGGTTCC GCACCCGCGA CCGGCTCGGC
GACGACCCCG GCGAGCATCA GCGGATGCTC GCCTTCGCGT CGGACCTCTA TATCCTCCAC
ACCGGGCTGC TGCCGCTCGG GATAAGCTGG TCGGACCATG GCCTGAGCGA CGTCAGCCTC
GACCATGCGC TGTGGTTCCA CCAGCCGTTC CGCGCCGACG AATGGCTGCT CTACACGATG
GACAGCCCCT ATGCCGGCGG CGCCCGCACG CTCGGCCGCG GCACGGTCTT CGCGCGGGAC
GGCCGGCTGG TCGCCTCGGT CGCCCAGGAA GGGCTGATCC GGCTGGCGCG GTGA
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| Protein sequence | MPRDMPKRES FVDETDHRFA HLFRFEEGDG GVLRAAPTGG PLFRLFGGQV LAQALAAAQH
SVAAGRLAHS CHAYFVRAGR VDRPIDFTVS RDTDGRSFSA RRVEARQGDE LILTLSASFH
AAEPGPVQQA TMPDVPDPLD LPPQEQAIAA ALPHMPPHRL VFWDRDIGLD VRAVEPFHTV
DPPRAPARRS FWFRTRDRLG DDPGEHQRML AFASDLYILH TGLLPLGISW SDHGLSDVSL
DHALWFHQPF RADEWLLYTM DSPYAGGART LGRGTVFARD GRLVASVAQE GLIRLAR
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