Gene Swit_2230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2230 
Symbol 
ID5197281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2485668 
End bp2487044 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content69% 
IMG OID640581776 
Productphosphate-selective porin O and P 
Protein accessionYP_001262727 
Protein GI148555145 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3746] Phosphate-selective porin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCGCA TTGCCCGCGT GGCCCTGGCC GCCACTGCCT CGCTGATCGC CATGCCGCTG 
GCCGCGGCCC CCCTGTCGGC CGAGGAGAGC CAGGCCCTGC GCGAGGAGGT CCGCGCGCTG
CAGGCCCGAC TCGCCGCGAT CGAGGCGCGG CTGGGCGAAG CGCCGCCGGG CGCTGCCCCG
GCGGCGGCAT CGGCCCCGGC CGTGACGGCG GCGGCCGCCG CTTCGGCCCC CGCGACGGCG
ATCGGCTGGA AGGGATCGCC GCAATTCACC AGCGACGATC GCAGCTTCAA GGTGAAGGGC
CGCATCCAGC TCGACGCGGG CTATGTCTCC AAGCCGCGCG GCATCGTCGA TCGCGGCCTC
GGCTTCTCGA ACGAGGTCCG CCGCATCCGG CTCGGCGGCG AGGGCAAGCT CGGCAGCGGA
TTCGGCTACA AGCTCGAGGT CGAGCTGTCG GACAACAAGG TCGGCCTGGT CGACACCTTC
GTCACCTATG ACACGGGCCC CTGGCAGGTC TCGATCGGCA ACCAGAACCA GTTCCAGTCG
CTCGACGAGC TGACCGGCGA CACCACCGGA TCGCTGATGG AGCGCGCCGC CTTCACCGAC
GCCTTCAACT TCGAGCGGCG GCTGGGCATC GCGGTCCAGT ATCACCGCAA GGACATCCTC
CTCCAGGGCG GCGTCTTCTC CGACGACATC GACGCGCTGG CCGACTCGAG CGACGGCCCG
AACGGCGGCG ACGAGAACAA CAGCTTCAGC ATCGACGGCC GCGCCGTCTA TGCGCCGAAG
CTGGGCGGGA CGCAGATCCA TCTCGGCGGC TCGGCGCATC TGCGCATGCT CAACCGGCTG
TCGGACGCGC CGACGCGCTA TCGGCAGCGT CCCTTCCTGC ACAGCACCAA CAGCCGCATC
CTCGCGACGC CGAACATGCT GGTCGACCGC GAGTTCAACT ATGGGCTGGA GGTCGCCGCC
ATCCATGGCC GCTGGCACAC CGCCGGGGAG GCGAACTGGC TCGACGCGAT CGGGCCGGGG
CCCAATTCGC GCTTCTTCGG CGGCTATGCC GAGGTCGGCT ATTTCCTGAC CGACGACACC
CGCACCTATC GCAACGGCAT CTTCGGCGGG GCCAAGCCCT CCTCGCCGTT CGGCAAGGGC
GGCATCGGCG CGATCCAGGT CAACCTGCGC TACGACTATC TCGACCTCAA CGACGGCGCG
ATCAGGGGCG GGACCCAGAA TGGCTGGTTC GCCGGCATCA TCTGGACCCC GGTCGAATAT
CTGCGCTTCA ACCTCAACTA CGGCTATCTC GCCTATACCG GCGCCGCGAT CCCGGCGGGC
GGGCGAACCG ACTATGGGAT GCATGTCGGC GGGGCGCGGG TCGAACTCGA CTTCTGA
 
Protein sequence
MFRIARVALA ATASLIAMPL AAAPLSAEES QALREEVRAL QARLAAIEAR LGEAPPGAAP 
AAASAPAVTA AAAASAPATA IGWKGSPQFT SDDRSFKVKG RIQLDAGYVS KPRGIVDRGL
GFSNEVRRIR LGGEGKLGSG FGYKLEVELS DNKVGLVDTF VTYDTGPWQV SIGNQNQFQS
LDELTGDTTG SLMERAAFTD AFNFERRLGI AVQYHRKDIL LQGGVFSDDI DALADSSDGP
NGGDENNSFS IDGRAVYAPK LGGTQIHLGG SAHLRMLNRL SDAPTRYRQR PFLHSTNSRI
LATPNMLVDR EFNYGLEVAA IHGRWHTAGE ANWLDAIGPG PNSRFFGGYA EVGYFLTDDT
RTYRNGIFGG AKPSSPFGKG GIGAIQVNLR YDYLDLNDGA IRGGTQNGWF AGIIWTPVEY
LRFNLNYGYL AYTGAAIPAG GRTDYGMHVG GARVELDF