| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2227 |
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| Symbol | |
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| ID | 5197278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2482495 |
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| End bp | 2484612 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640581773 |
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| Product | Pyrrolo-quinoline quinone |
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| Protein accession | YP_001262724 |
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| Protein GI | 148555142 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.580603 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTGA TCCCATGGCG CGGTCGCCGC GCCGTCATCC GGACGACGCT GGCGGGCCTG
ATCGCCCCGG CGCTGGTCGC CGCCAGCCTG GCGGGCGGCA CGCCGCCGCG CGACTGGCAG
TTGGAGACCG CCTATCATTA TCCGGGCACG CAGGTCGACG CGGCGACCGC CGGCCGGCTG
GGCGTCGCCT GGGAGTTCGA CGATTTCGTC GTGCGCGGCA GCACCCATCG CGGGGTCGAG
GCGACCCCGG TCGTGGTCGA CGGGGTGATG TACCTGACCG GGCCGTGGAG CGTGGTCTAC
GCGCTCGACG CGCGCACCGG AAAGCCGCTC TGGCAATATG ATCCGGAGGT CGACGGCCAG
TTCGCCCGCC GCACCTGCTG CGACGCGGTC AATCGCGGCG TCGCGGTCGC CGACGGCGTG
GTCTATGTCG CCGCGCTCGA CGGCTGGCTG GCGGCGGTCG ACGCCAGGAC CGGCAAGGAG
CTGTGGAAGG TCGACACGAT CACCGACCGC AAGATGAGCT ATGCGATCAC CGGCGCGCCG
CGCGTCGCGG GCAGGAACGT CGTGATCGGC AATGGCGGCG GCGAGATGGG CGCGCGGGGC
TATGCCAGCG CCTATGACCG CAAGACCGGC AAGCTCGCCT GGCGCTTCTT CGTCGTGCCG
GGCGATCCCG CCAAGGGCGC CGACGAGCAT CCCGAGGTGA CCGAGGCGCG CAAGACCTGG
GACCCCAAGT CGCGCTGGGA CCTGGGCGGC GGCGGCACGC CGTGGGATTC GATCGTCTAC
GATCCCGACA CCAACATCGT CTATGTCGGC ACCGGCAACG GCATGCCGCA CCCGTCCTGG
CTGCGCAGCC CGGCCGGCGG CGACAATCTC TATCTGTCCT CGATCGTCGC GATCGACGCC
GACACCGGCC GCAAGAAGTG GCATTACCAG ACCACACCCG CCGACAGCTG GGACTATACC
GCGACCCAGA ACATGATCCT CGCCGACATC GAGATCGGCG GCCGCCCGCG CAAGGTGATC
ATGCAGGCGC CGAAGAACGG CTTCTTCTAC GTGCTCGACC GGGTGACCGG CGAACTGCTG
TCGGCGGAGA AGTTCACCAC CGTCACCTGG GCCGACCGCG TCGACATGAA GACCGGCCGG
CCGGTGGTCA GCGACCAGTC GGACTATTCG AGGAAGACCA AGCTGGTCTG GCCGTCGGAG
GCCGGCGGGC ACAATTGGCA ACCCATGTCG TACAGCCGGG AAACCGGGCT GGTCTACATC
CCGGTGCTCG AGGCGCCGAT GACCTTCCAG ATGCTGGAGC AACCGAAATA CCGGCCCTAC
AGCAACCTGC AGGGCTCGGC CGCCTCCTTC CCCAGCTTCG CCTTCGGATC GAACAAGACC
GGCGGCGCCG AAGACATTCT CGCCGGCCAG CCCAGGCCGA CCTTCCAGCA GATCGTCCGC
GCCTGGGACC CGGTGCGCCA GAAGGAGGCC TGGGCGACGA AGCCGATGCC CTTCTGGAGC
GGCGGCACGA TGGTGACCGG CGGGCTCGTC TTCCAGGGTT CGGCCGACGG CTGGCTGACC
GCCTATGACG CCAGGACCGG CGCCGTGGTC CACCGCGTCG ATGTCGGCAC CGGCATCATG
GCATCGCCGA TGAGCTACAC GATCGACGGC GTCCAATATG TCGCGGTGAC GGCCGGCATC
GGCGGCGCCC TCAACGTGTC CTACCCGCCC GGCGCGGTGG CGATCGAGCG GCAGAACAGC
GAGCGGCTGA TCGTGTTCCG GATCGGCGGC CCCGCGCCCA GGCTGCCGCC GCTGCGCGAG
GCCCGGCCGT TCACCGTGGC GCCCGCCCAA TATCGCGGCA CCCAGGCCCA GGAGCAGCAC
GGCGCCGCCC TCTACGGCGA GAATTGCGGG CGCTGCCACG GCGGGCCGAC CGGCGCGGGC
GGCTATCCCA ACCTGTGGAA GATGACGCCC GAGACGCATG CCGCGTTCGA GTCGATCGTC
CTCGACGGCG CCTTCGCCTA TGCGGGCATG GCCTCCTTCG CCGACGTGCT GAGCAAGCAG
GACGCCAGGG ACATCCACGC CTTCCTGGCG AAGCCGCACG ACGAGAAGGC CCAGCCCACC
GAGAACCGGA TGCACTAA
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| Protein sequence | MKLIPWRGRR AVIRTTLAGL IAPALVAASL AGGTPPRDWQ LETAYHYPGT QVDAATAGRL
GVAWEFDDFV VRGSTHRGVE ATPVVVDGVM YLTGPWSVVY ALDARTGKPL WQYDPEVDGQ
FARRTCCDAV NRGVAVADGV VYVAALDGWL AAVDARTGKE LWKVDTITDR KMSYAITGAP
RVAGRNVVIG NGGGEMGARG YASAYDRKTG KLAWRFFVVP GDPAKGADEH PEVTEARKTW
DPKSRWDLGG GGTPWDSIVY DPDTNIVYVG TGNGMPHPSW LRSPAGGDNL YLSSIVAIDA
DTGRKKWHYQ TTPADSWDYT ATQNMILADI EIGGRPRKVI MQAPKNGFFY VLDRVTGELL
SAEKFTTVTW ADRVDMKTGR PVVSDQSDYS RKTKLVWPSE AGGHNWQPMS YSRETGLVYI
PVLEAPMTFQ MLEQPKYRPY SNLQGSAASF PSFAFGSNKT GGAEDILAGQ PRPTFQQIVR
AWDPVRQKEA WATKPMPFWS GGTMVTGGLV FQGSADGWLT AYDARTGAVV HRVDVGTGIM
ASPMSYTIDG VQYVAVTAGI GGALNVSYPP GAVAIERQNS ERLIVFRIGG PAPRLPPLRE
ARPFTVAPAQ YRGTQAQEQH GAALYGENCG RCHGGPTGAG GYPNLWKMTP ETHAAFESIV
LDGAFAYAGM ASFADVLSKQ DARDIHAFLA KPHDEKAQPT ENRMH
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