| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2221 |
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| Symbol | |
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| ID | 5199457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2474980 |
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| End bp | 2476671 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640581767 |
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| Product | CopA family copper resistance protein |
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| Protein accession | YP_001262718 |
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| Protein GI | 148555136 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2132] Putative multicopper oxidases |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01480] copper-resistance protein, CopA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.195638 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.807745 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGAT CATGGGACCG GCGCGCGATG TTGCGCGCCG GCATATTGGG CGCGACGGCG
GCCGGGCTGG GCCAGTGGCC GGCCTGGGCA CAGACCGGCA CGCCGGGCAT CACCGACCCC
CTGCCCGAGG AGTCGGGCGG GGACATCCAC CTGCGCATCG GCCACGCGAC GATGCGCATC
GACGGCCGCG ACCGGCTGGC GATCGGCATC AACGGCGGCG CCCCCGCGCC GATCCTGCGG
CTGCGCGAGG GGCGGCCCGT CCGCATCCGC GTCGACAACA GCTTGGACGA GGAGACCTCG
CTCCATTGGC ACGGGCTGAT CCTGCCCTTC CAGATGGACG GGGTGCCGGG CGTTTCCTTT
CCCGGCATCG CGCCGCGATC GAGCTTCACC TACGAGTTCC CCGTCGTGCA GGCGGGCACC
TATTGGTATC ACAGCCATTC GGGCCTGCAG GAGCAGCTCG GCCTCTACGG GCCGATCGTG
ATCGATCCGG CCGGGACCGA TCCGATCGCC AGCGATCGCC AGCATGTCGT GATGCTGTCC
GACCACAGCC GGCTCCCGCC GCATGTGCTG TTCCGCAAAC TCAAGCAGGA GCCCGGCTAT
TTCAACATGC AGCGGCAGAC GCTGGCCGGC CTGCTGGCGG GCCGCGACCA GGGGCTGAAG
GACCGGCTCG ACTGGGGGGC GATGCGGATG GACCCGACCG ACATCTCCGA CGTCACCGGC
AGCACCTACG ACTATCTGGT CAACGGCCAT GGCCCGCGCG ACAACTGGAC CGCGCTGTTC
CGGCCGGGCG AGCGGGTGCG GCTGCGGCTG GTCAACGCCT CGGCGATGAC GATCTTCAAC
GTCCGCATCC CCGGGCTGAA GATGACGGTG GTGCAGGCCG ACGGCCTGGA CGTCCGCCCG
GTCGCCGTCG ACGAGCTGCA GATCACCGTC GCCGAGACCT ATGACGTGAT CGTCGAGCCG
GCCGAGGATC GCGCCTATAC GATCGTCGGC GAGGCGGTCG ACCGTTCGGG CATGGCCCGC
GCGACCCTCG CGCCGCGCCT CGGCATGGTC GCGGAGGTGC CGCCGCTGCG CCGCCGCCCG
GTCGCCGACA TGACCGACAT GGGCATGGAC ATGAGCGCCA TGGAAGGCTT CGAGATGGAC
ATGTCGATGC GCAACCCGGC CAATGCGCCG TCGGTGGCGA TGGGGCCGGG CGTGCAGACC
CTCTCGCCGA TGCCGAAGGA CCGGACCGGC GAGCCGGGGC AGGGCCTCGC CGATGCCGGG
CACAAGGTGC TGGTCTATCG CGACCTCGTC GCGCGCGAGC GCAACCCCGA CGTCCGCGCG
CCGACGCGCT CGATCGACAT CCACCTGACC GGGAACATGG AGCGCTACAT GTGGTCGTTC
GACGGCAAGA CGCTGTCGGA GGCGCGCGAT CCGATCCCGA TAAGGGTGGG CGAACGGGTG
CGGGTGAACC TGATCAACGA CACGATGATG GCGCACCCGA TCCACCTGCA CGGCCATTTC
TTCGAACTGG TCACCGGCCA TGGCGACCAT GCGCCGCGCA AGCACACCGT CAACGTAGCC
CCGGGCGGGC TGGTCAGCTT CGACGTCACC GGGGTCGAGG GCGACTGGGC GTTCCACTGC
CACATGCTCT ACCACATGCA TGCCGGGATG ATGCGCGTCG TGCAGGTGCG GGCCGAGGGA
GGCGCAGCAT GA
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| Protein sequence | MNRSWDRRAM LRAGILGATA AGLGQWPAWA QTGTPGITDP LPEESGGDIH LRIGHATMRI
DGRDRLAIGI NGGAPAPILR LREGRPVRIR VDNSLDEETS LHWHGLILPF QMDGVPGVSF
PGIAPRSSFT YEFPVVQAGT YWYHSHSGLQ EQLGLYGPIV IDPAGTDPIA SDRQHVVMLS
DHSRLPPHVL FRKLKQEPGY FNMQRQTLAG LLAGRDQGLK DRLDWGAMRM DPTDISDVTG
STYDYLVNGH GPRDNWTALF RPGERVRLRL VNASAMTIFN VRIPGLKMTV VQADGLDVRP
VAVDELQITV AETYDVIVEP AEDRAYTIVG EAVDRSGMAR ATLAPRLGMV AEVPPLRRRP
VADMTDMGMD MSAMEGFEMD MSMRNPANAP SVAMGPGVQT LSPMPKDRTG EPGQGLADAG
HKVLVYRDLV ARERNPDVRA PTRSIDIHLT GNMERYMWSF DGKTLSEARD PIPIRVGERV
RVNLINDTMM AHPIHLHGHF FELVTGHGDH APRKHTVNVA PGGLVSFDVT GVEGDWAFHC
HMLYHMHAGM MRVVQVRAEG GAA
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