Gene Swit_2219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2219 
Symbol 
ID5199455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2471951 
End bp2473627 
Gene Length1677 bp 
Protein Length558 aa 
Translation table11 
GC content66% 
IMG OID640581764 
Productrecombinase 
Protein accessionYP_001262716 
Protein GI148555134 
COG category[L] Replication, recombination and repair 
COG ID[COG1961] Site-specific recombinases, DNA invertase Pin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.338837 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.810308 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCGCGC GGCCGCCCGC AAGGAGCATC GCGCGCGAAG CCAGAAAGCT GATTCGCATG 
CGCACCCTGA TCTACGCCCG CTTCAGTAGC GACCTTCAGA ACAGTCGATC GATCGACGAT
CAGATACGCA TCTGCCGCGA GCGCGCGGAG ATCGAAGGCT GGGAGATCGT CGATATCTTC
ACGGATTACG CAATCAGCGG CGCGGCCGGC ATCGGCGAAA GCCAGCGCCC CGGCCTCAAC
GCGCTGCTCG CGCGGGTGAA CAACGGCGGC ATCGATCAGG TGCTTGCGGA AACAACCAGC
CGGATCGCGC GCCACCAGGG CGACGCCTAC GCGATCCGCG AGCGTCTGAA TTATGCCGGC
GTCCGCCTGT TCACCCTCGC CGATGGCGAG ATCGACGACA TCAAGGGATG GGTGAAGGGC
TTCCTCGACG CCCAGCAGCG CAAGGACTTG GCCTTCAACA TCAAGCGCGC GCAAAAGGGC
GTGGTGGCCG AGGGGCGCGC GCCAGCCGGC CTCGCCTATG GCTACAAGCG CGCGAACCGT
TTCGATGAAC GCGGCAACGT GATCCGAGGC CTCCGGTCGA TCGACGATGA ACAGGCCGCG
ATCGTCCGTC GTATCTTCGC CGAATATGCG GCCGGCGACA CCGCGCGCGA CATCGCAATC
CGATTGAACC GCGAGGGCGT GCCGGGGCCG ACCGGCGGCA CCTGGCGGGT TTCGACGATC
ACCGGCGATC GGCAACGGCA AAACGGGATG CTTCAGAACC GGCTCTACGC CGGCGTCATC
GTCCATAACC GCACCAGCAA GGTGGTCGAC CCTGACAGCC GCCGCGTTCG CATCCGTCCC
AATCCGGAAA GCGAATGGAT CTCGGAACCG GCGCCGCAAC TGCGGATCAT CGACGAACAT
GTCTGGCAGG CCGTGTGCGA CCGGCGCGCG GCGATCGCGC ATGTGCCGAT GCGCCTGCAA
CGCAAGCCCA AGCGCCTGCT GTCAGGGCTG GCCGTCTGCG GCGTCTGCGG TGGCGGGTGG
GTGGTGGTGA CGCCCCGGAA GATGGGTTGC GGCCGCGAGC GTGACGGCGG GGGTTGCACC
AACAATCGCA TGATCACGGT GGAGAGGCTC GAAGCGCGGG TGCTCAATGG CCTTCAGGAA
AAGATGCTCG ACCCCGAACT GGTGGCGATC TTCGTCCAGG AGTTTCACCG CGAGGCCCAA
ACCGCCGCCG CCGAGCGCAA AACCGAGCGC GCCCGGCTCG AACGCAAGCT GGCCGAGGCG
AGCCGCAAGG TCGAACGTCT CGTGTCGGCC TTTGCCGCTG GGGCGGGCGA GTTCGAGGAA
ATCCGGGCCG TGCTGACCAA AGCGCGAGCC GACCGCGACC AGGCCGCCGA GGCACTTTCC
GAGATCGAGG CGGATAACGT CGTCGCCCTG CATCCCTCGA TCCTCGACGA CTACCGCCGG
CAGATGTCCG AGCTTGCCGC CGCGCTGTCG ACCGATCCGG ACTTGCGCGA CGAAGCCGTG
CCGATCGTGC GCGGCCTGAT CGAGCGGGTG ACCGTCACGC CCAGCGAGGG ACCGAAGGGC
GTCGATATCG AGGTGACGGG CAAGCTTGCC AACATCCTGT CGTTGGCCGC CGGCAAGGCC
GTTCGTGGCC CAGGTATGTT TCTGTTGGAG CGGGCGAAGG GAATCGAACC CTCCTAG
 
Protein sequence
MRARPPARSI AREARKLIRM RTLIYARFSS DLQNSRSIDD QIRICRERAE IEGWEIVDIF 
TDYAISGAAG IGESQRPGLN ALLARVNNGG IDQVLAETTS RIARHQGDAY AIRERLNYAG
VRLFTLADGE IDDIKGWVKG FLDAQQRKDL AFNIKRAQKG VVAEGRAPAG LAYGYKRANR
FDERGNVIRG LRSIDDEQAA IVRRIFAEYA AGDTARDIAI RLNREGVPGP TGGTWRVSTI
TGDRQRQNGM LQNRLYAGVI VHNRTSKVVD PDSRRVRIRP NPESEWISEP APQLRIIDEH
VWQAVCDRRA AIAHVPMRLQ RKPKRLLSGL AVCGVCGGGW VVVTPRKMGC GRERDGGGCT
NNRMITVERL EARVLNGLQE KMLDPELVAI FVQEFHREAQ TAAAERKTER ARLERKLAEA
SRKVERLVSA FAAGAGEFEE IRAVLTKARA DRDQAAEALS EIEADNVVAL HPSILDDYRR
QMSELAAALS TDPDLRDEAV PIVRGLIERV TVTPSEGPKG VDIEVTGKLA NILSLAAGKA
VRGPGMFLLE RAKGIEPS