Gene Swit_2215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2215 
Symbol 
ID5196151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2470127 
End bp2470594 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content65% 
IMG OID640581760 
Producthypothetical protein 
Protein accessionYP_001262712 
Protein GI148555130 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.562594 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.423844 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGA TCACCTATCG GATAAGCTGG CCGAGGCCCG CGACGCCTTG CGCCTTGCAG 
CCCAAATGGG CGGGCGAGTT CCGGAACTTT GACGATTGGG TGAGCTTTGC CACCACCCGC
CTGACCGGAA CCGTCGACAA CCTGACCGGC AGCGAGTTGC GGGCCATATG TGTCGATGCG
CTTGGCCGCC GCTGCACCAT GGGCGCGCAC TTCATGCGGG CTCGCGATGA TGACGCGTTC
CCGGTGCGCT ATTTCTGGGA ACTGGAGCCC GTAGCGCCCG AGTTCGACAG CGCCGCCCGG
CTCGCGTTGC CGCTGATCGA AGCCGACCGC GCGAGCTTTT TCGATTGCCA TACGGTCGGA
GGTGATCCCG CCTCTCTTTC CGACGAGGAA GCCCGAATGA TCGCGGCCTA CGACGCCGCG
ATCTGCGCAC TGGCATCGGC TGTCGCCAAG GGGAACGGTC GACCATGA
 
Protein sequence
MSAITYRISW PRPATPCALQ PKWAGEFRNF DDWVSFATTR LTGTVDNLTG SELRAICVDA 
LGRRCTMGAH FMRARDDDAF PVRYFWELEP VAPEFDSAAR LALPLIEADR ASFFDCHTVG
GDPASLSDEE ARMIAAYDAA ICALASAVAK GNGRP