| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2209 |
|---|
| Symbol | |
|---|
| ID | 5198265 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 2466980 |
|---|
| End bp | 2467732 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640581754 |
|---|
| Product | putative phage repressor |
|---|
| Protein accession | YP_001262706 |
|---|
| Protein GI | 148555124 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2932] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.111819 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAGA AGCCCGAAGA TCGGATGGCG ATACTCGCCC GGATTGATCA GTTGATCGCT
GAGCGAGGCA CCACCGAATT TGCCGTGTCC ACCGCTGTCG GCAGGAAGGA CTTGATCCGC
GACCTGCGCC GCAAGGGGAC GATCGGGCCG GACGGGATCA GGCTGCTGGC CGACTATTTC
GGCGTGTCCG TGGACTGGCT GCGATACGAG GAGGGGCCGG TTTCGGTGCC GACAACACCA
GGCCCTCCAC ACAAGGAAGC CTATCCCGAT TTTCAGAGGC ATTATGAGCG GCCACAGGAC
GAGCCGCCGA CTGTACCGGT ATGGGGGTCT GGATTGGGGG CGACTGTTGA GGTGGATGCC
GATGGCGTCC TGGTGTCTGT GGAAACGCTG CTGATCTTCC CGAATGAGGC TGTCGATCAA
CTCCGCCGCC CTTTTCGCCT GATCGGCCGG CCGGGCATCT ATGCCTTCTA TTTCGAGGGC
GACAGCATGG AGCCCAAATA TTCTCCCGGA GAGCCCGCCT TCGTCGACGG GAACAAGCCG
CCGGTCGTGA TGGATTATGT GCTAGTCCAG CTCCGCAGGC CGGAAGGGGA TGACGAAACA
ATCCATACGG TTCTGGCAAA GCGCTTGGTG AAGAGAACCG CTGCCTATGT CGAGCTGGAG
CAGTTCAATC CGCCAATGCG CTTCAAGGTG CCTCGTGAAC AGATTGCCCG CATGCACAAA
ATCTTGCAGT CGAGCGACAT CTATTCGGTC TGA
|
|---|
| Protein sequence | MAKKPEDRMA ILARIDQLIA ERGTTEFAVS TAVGRKDLIR DLRRKGTIGP DGIRLLADYF
GVSVDWLRYE EGPVSVPTTP GPPHKEAYPD FQRHYERPQD EPPTVPVWGS GLGATVEVDA
DGVLVSVETL LIFPNEAVDQ LRRPFRLIGR PGIYAFYFEG DSMEPKYSPG EPAFVDGNKP
PVVMDYVLVQ LRRPEGDDET IHTVLAKRLV KRTAAYVELE QFNPPMRFKV PREQIARMHK
ILQSSDIYSV
|
|---|
| |