| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2190 |
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| Symbol | |
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| ID | 5200813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2449644 |
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| End bp | 2451710 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640581735 |
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| Product | peptidase S14, ClpP |
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| Protein accession | YP_001262687 |
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| Protein GI | 148555105 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000592191 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGGAAA TCCTGATCTA CGGGATCGTC GGCGATAGCT GGGACGGTCT CGATGCCAAT
ACGATCGTGC CGCTGATCTC GGCGGGCGAC GATGATCTCG ACGTGCGGAT CAACAGCCCC
GGCGGATACG TCATGGAGGG TCTGGCGATC TACAACGCGA TCATCCGCGA GCGGGGCAAG
GGCCGCAAGG TCACGACGCA TATCGATGGC CTGGCGGCGT CGATGGGGTC GATCCTAGCG
ATGGCCGGCG AAGAAATCGT CATGGCCGAT AATGCGCTGC TGATGATCCA TAATCCGTGG
GACTGCGCCT GCGGCGATGC GATCGAGCTG CGCCGCGCCG CCGATCGGCT CGACCAGCTC
CGCGATCAGA TGGTCGGCAT CTACAGCAAG GCCACCGGCC TGGAGGCCGA CGCGCTGATC
CCCATGCTCG ACGCCGAGAC GTGGATGACC GCTACCGAAG CGCTCGCGTT GAACTTCATT
ACGTCGATCG CCCCCGCCGA GATCGAGGCG GCAGCGCTCG ACGTGACCAA ATTCGGGTTC
AAGCATGTGC CCGATAGTCC GCGCATCGCC GCCATGGCGA TGGGCGGTTC CCGGCCGGCA
CCGGCCACTC GCAAACCGAA AGGAACTGAC ATGCCCGGAC AGGGTAAGGA TACGGTGGCC
GGCACCGAAG CGCCGGACAC CATCACCACC ACTGAGGCGC AGGCGCTCGC CAATAATGCC
ATCGTCGCGG AACGCACCCG CGCGACCGGC ATCCGCGCGC TCGCCGACAA GCACAAGCTC
GGCGTGGCCT GGGCCGACAA GCTGATCGGC GAAGGCAAGT CGCTGGAAGA GGCCCGCGCC
TGCGCGCTCG ACGCGCTGGC CGAGCGCGGT GACAGCGCCG GTATCGGCCA CAGCGGTCCG
GCCGTCGTCG TCACGCAGGA CGCGCGCGAC AAGTGGCTGA CCGGCGCCGC GAACTCGATC
ATCATGCGCG CCGGCATCGG GGGCACGATC AAGGCCGCTG CCCAGAAGCG CGGCGAAAAG
ATCGATCTCG ATCCGGGTGA GTTCCGCGGC ATCCGTAATA GCGAACTGGC GCGCATGTCG
CTGGAGATGT CGGGCGTCCG CATCCGCACC TATGACCGTG ACAAGATCGT CGGCATGGCG
ATAACCCATA GTGCCATGGG CAGCGGCCCC GGCCAGACCG GCAGCGACTT CGCTGTGCTG
CTGGAAAACG TCATGCACAA GACGCTTCAG GCGGCGTATC TGATCGCGCC CGATACGTGG
ACGCGGTTCT GCGGGATCGG GTCCGTCAGC GATTTCCGGG CGCACAACCG CTATGTCCGG
GGCACGTTCG GTGAGCTCGA CGATCTCACC GAAGATGGCG AGTTCACGCG GAAGGCAATT
CCCGATGGCG CGAAGGAGTC AATCGCAGCC GGGACCAAGG GCAACACGGT CGGCCTGTCG
CGTCAGGCGA TCGTCAACGA CGATATGGAG GCCTTCTCGT TCACTGCTAT CGATCTCGGC
CGGGCCGCCA AGCTGACTAT CGAAAAGGCC GTGTATCGCC TGCTGGCCAT GAATGGTGGC
CTCGGCCCGC TGATGAAGGA CGGCAAGACG CTGTTCCACG CCGATCACGG CAATATCGCG
ACGGGTGCCG CGCCTTCGGT TGACAGCTTC GACAAGATCG CGGTGCTGAT GGGCGAGCAG
AAGGACTTGA GCGGCAACGA GTTCCTCGAC ATCAGCCCGG CCGTCTGGCT CGGGCCGCGC
GCCATGCAGG GCGACGTCAT CGTCATCAAT GGCGCGGAAT ATGATCCGGA CACGGCCAGC
AAGTTGCAGA GGCCGAACAA GGTCCGGGGC CTGTTCAAGG ATATCGTCGG TACGCCGCGC
CTGACTGGCG CGCCCTGGTA TGCGTTCGCC GATCCCGAGA TCGCGCCCGC GCTCGAAGTC
GTGTTCCTCG ACGGCGAGCA GGAACCGCTG CTCGATAGCA AGGATGGCTG GGACTATGAC
GGCGTGGAGT GGCGCATTCG CCACGATCAT GGCGCCGGGG CGGTCAACTA TCGTTCGGCG
GCCCGGAACC CCGGCGCGGG CGGCTGA
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| Protein sequence | MTEILIYGIV GDSWDGLDAN TIVPLISAGD DDLDVRINSP GGYVMEGLAI YNAIIRERGK
GRKVTTHIDG LAASMGSILA MAGEEIVMAD NALLMIHNPW DCACGDAIEL RRAADRLDQL
RDQMVGIYSK ATGLEADALI PMLDAETWMT ATEALALNFI TSIAPAEIEA AALDVTKFGF
KHVPDSPRIA AMAMGGSRPA PATRKPKGTD MPGQGKDTVA GTEAPDTITT TEAQALANNA
IVAERTRATG IRALADKHKL GVAWADKLIG EGKSLEEARA CALDALAERG DSAGIGHSGP
AVVVTQDARD KWLTGAANSI IMRAGIGGTI KAAAQKRGEK IDLDPGEFRG IRNSELARMS
LEMSGVRIRT YDRDKIVGMA ITHSAMGSGP GQTGSDFAVL LENVMHKTLQ AAYLIAPDTW
TRFCGIGSVS DFRAHNRYVR GTFGELDDLT EDGEFTRKAI PDGAKESIAA GTKGNTVGLS
RQAIVNDDME AFSFTAIDLG RAAKLTIEKA VYRLLAMNGG LGPLMKDGKT LFHADHGNIA
TGAAPSVDSF DKIAVLMGEQ KDLSGNEFLD ISPAVWLGPR AMQGDVIVIN GAEYDPDTAS
KLQRPNKVRG LFKDIVGTPR LTGAPWYAFA DPEIAPALEV VFLDGEQEPL LDSKDGWDYD
GVEWRIRHDH GAGAVNYRSA ARNPGAGG
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