| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2165 |
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| Symbol | |
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| ID | 5196272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2426690 |
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| End bp | 2427148 |
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| Gene Length | 459 bp |
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| Protein Length | 152 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640581710 |
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| Product | BadM/Rrf2 family transcriptional regulator |
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| Protein accession | YP_001262662 |
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| Protein GI | 148555080 |
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| COG category | [K] Transcription |
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| COG ID | [COG1959] Predicted transcriptional regulator |
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| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.00710337 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.480622 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACGCG ATAGCCGATT GTCGGGCGTG CTCCATGTGC TGCTGCACAT GGCGGAACAG
GACGGCCCTG TGACGTCGGA GGTGCTGGCG AAGGCGATGG ACACCCATCC GGTCGTCGTC
CGCCGGGTCA TGGCGGGGTT GCGCGAGCAG GGGCTCGTCC GCTCCGAAAA GGGCCATGGC
GGCGGCTGGA CGATCGCCCG GCCGCTCGAC GGCATCACGC TTCGGGACAT CTACGGCGCG
CTGGGCGGTC CCTCGCTGCT GGCGATGGGG CATCGGACCG AGGCGCCCGG CTGCCTGGTC
GAGCAGGCGG TGAACGCGGC GCTCGGACGG GCCTTCCACG ATGCCGAGGC GCTGCTGCTC
GCGCGCTTCG GAGAGGTTAC GCTGGCGATG CTCAGCGCCG ACTTCCACGC GCGCATGACG
GCCCGGCCGC AGGGCCCCAA GGAGATCGAC CATGGCTGA
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| Protein sequence | MKRDSRLSGV LHVLLHMAEQ DGPVTSEVLA KAMDTHPVVV RRVMAGLREQ GLVRSEKGHG
GGWTIARPLD GITLRDIYGA LGGPSLLAMG HRTEAPGCLV EQAVNAALGR AFHDAEALLL
ARFGEVTLAM LSADFHARMT ARPQGPKEID HG
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