Gene Swit_2158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2158 
Symbol 
ID5198577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2419185 
End bp2419535 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content64% 
IMG OID640581703 
Productglutathione-dependent formaldehyde-activating, GFA 
Protein accessionYP_001262655 
Protein GI148555073 
COG category[S] Function unknown 
COG ID[COG3791] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.0585647 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTTG AAGGAAGCTG TCATTGCGGC AAGGTGGCCT ATACGGTCGA TGCGGAGGTG 
CCGGCCCAGG CGATGGCGTG CAACTGCTCG CACTGCCGGC GCAAGGGCTT CCTTCTCGCC
TTCTTCCCCG CCGCGCAGTT CCGGCTGGAG CGGGGCGAGG ACGATCTGAA GAGCTATTTC
TTCCACAAGC ACGCGATCGA GCATCGCTTC TGCACGACCT GCGGCACCCA GTCCTTCGCG
ATGGGGAAGA TGCCCGACGG CAGTGAGATG GCGGCGGTCA ACCTGCGCTG CGTCGAGGGC
GTCGATCCCG ATGCGCTCGA GATACAGAAG GTCGACGGGG CCAGCTTCTG A
 
Protein sequence
MAFEGSCHCG KVAYTVDAEV PAQAMACNCS HCRRKGFLLA FFPAAQFRLE RGEDDLKSYF 
FHKHAIEHRF CTTCGTQSFA MGKMPDGSEM AAVNLRCVEG VDPDALEIQK VDGASF