Gene Swit_2157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2157 
Symbol 
ID5198576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2418388 
End bp2419185 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content70% 
IMG OID640581702 
Producthypothetical protein 
Protein accessionYP_001262654 
Protein GI148555072 
COG category[S] Function unknown 
COG ID[COG1801] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.579466 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGCG CCATCCATGT CGGCGTCGGC GGCTGGACCT ACGAGCCGTG GCGCGACAAT 
TTCTACCCCA AGGGCCTGGC CCAGGCCCGC GAGCTCGAAT ATGCCGGCCA GCGGCTGACC
GGGATCGAGA TCAACGGCAC CTATTACGGC ACCCAGAAGC GCGAGAGCTG GCGGAAATGG
GCCGCCACCG TGCCCGACGG CTTCGTCTTC ACGGTCAAGG CGTCGCGCTT CTGCACCAAC
CGCAAGGTCC TGGCCGACGG GGCGGAGTCG ATCGCCAAAT TCGTCGGGCA GGGGATCGCC
GAGCTCGGGC CGAAGCTCGG CCCGATCCTG TGGCAGTTCA TGGGTACGAA GAAATTCGAG
CCCGACGATT TCGCCCGCTT CCTCGACCTG CTGCCCGCGG AGCAGGAGGG GGTGGCGTTG
CGCCATGCCT TGGAGGTGCG GCACGACAGC TTCGTCTGCC CCGCCTTCGT CGACCTGGCG
CGCGAGCGCG GCTGCGCGGT CGTGTTCGCC GAGCATGAGA CCTATCCGAT GATCGCCGAC
CTGACCGCGC CCTTCGCCTA TGCGCGGCTC CAGCGGACCA GCGCCGAGGT GCCGACCGGC
TATGACGATG CCGCGCTCGA CCGCTGGGCC GGGATCGCCC GGTCATGGGC GGCGGGCGAG
GCGCCCGAGG GGCTGCCCTA TGCGGGTTCG CCGACGGACG GCGGCGCGGA CGGGCGCGAC
GTCTTCCTGT TCCTCATCGC CGGGGCGAAG GAACGCAATC CGGCGGGGGC GCAGGCGCTG
ATCGAGCGGC TGGGGTAG
 
Protein sequence
MAGAIHVGVG GWTYEPWRDN FYPKGLAQAR ELEYAGQRLT GIEINGTYYG TQKRESWRKW 
AATVPDGFVF TVKASRFCTN RKVLADGAES IAKFVGQGIA ELGPKLGPIL WQFMGTKKFE
PDDFARFLDL LPAEQEGVAL RHALEVRHDS FVCPAFVDLA RERGCAVVFA EHETYPMIAD
LTAPFAYARL QRTSAEVPTG YDDAALDRWA GIARSWAAGE APEGLPYAGS PTDGGADGRD
VFLFLIAGAK ERNPAGAQAL IERLG