Gene Swit_2154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2154 
Symbol 
ID5197853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2415647 
End bp2416198 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content69% 
IMG OID640581699 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_001262651 
Protein GI148555069 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCCCC TGCTGCCCGT CCTGAGCTTG ATCGCCGCCC TCGCCCTGCC CGCCGCCGCG 
CCAGCCGCGC TCAAGGTCGG CGCCAAGGCG CCGGCGTTCG ACACGCGCGC GTCGCTCGCC
GGCAAGGATT TCGACTTCTC GCTCGCCAAG GCGCTCAAGA AGGGCCCGGT CGTGCTCTAT
TTCTTCCCGG CCGCCTTCAC CAAGGGCTGC ACGGTCGAGG CGCACGAGTT CGCCGAGGCG
ACCGACGACT TCGCCAGGCT GGGCGCGACC GTGGTCGGCA TGGCGGCCGA CCCGATCGAA
AAGCTCAACC AGTTCTCGGT CCAGGAATGC CGCAACAAAT TCGCGGTCGG CGTCGCCACC
CCGGCGATGA TCAAGGGCTA TGACGTCGCG CTGGAGGCGG GGCTGATCCC CAACGTCACC
GGGCGCACCA ACCGCACCTC CTATGTGATC GCCCCCGACG GGCGGATCGT CTTCGTCCAT
TCGGAGCTGG GCGTCGCGGG CCATGTCAGC GGCACGATGA ACGCGGTCAA GGCGCTCAAG
GCCAAGCGCT GA
 
Protein sequence
MRPLLPVLSL IAALALPAAA PAALKVGAKA PAFDTRASLA GKDFDFSLAK ALKKGPVVLY 
FFPAAFTKGC TVEAHEFAEA TDDFARLGAT VVGMAADPIE KLNQFSVQEC RNKFAVGVAT
PAMIKGYDVA LEAGLIPNVT GRTNRTSYVI APDGRIVFVH SELGVAGHVS GTMNAVKALK
AKR