Gene Swit_2148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2148 
Symbol 
ID5199621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2408667 
End bp2409377 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content73% 
IMG OID640581693 
Producthypothetical protein 
Protein accessionYP_001262645 
Protein GI148555063 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.371725 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACAGG CCCTTCTCCT CGCCCTGCTG CTGGCGTCGC CCGTCGCCGC GCGCCGCGAC 
GGGCCGCCGC CGGTCTGTCC CGAACCGGTG CGGCCGGTGC TGTTCATCTC GCCGATGGGC
GAGCCGTTCC GGCCGAAGGG AGCCAATGAT GATCCTGGCG CCGACGACCC GGTCCGGCGC
TGGTTCGACC AGGCCGACCG CAACAAGGAC GGCGTGCTGA CGGTGGGCGA GCTGATGCTC
GACGGCGACC GTTTCTTCGC GACGCTCGAC AAGGACAAGA GCGGCGAGCT TCTGCCCGAC
GAGGTCAGCG CTTACGAACA GGACGTCGCC CCCGAGATCC GCCTCTACCA GCGGCGCCCC
GAGCGCCCGG CCGACGGCGG CGCGAAGGAC GACGATCGCG ATCGGCCGCG ACCGGCGAAG
CGGCGCGGCG GCCGGCCCGG CGCGGGGGCC GGCTATGACG GCGCGATCGG CGCGGGGCGC
TACGCCTTCC TCAACATCCC CAATCCGGTG GCGGCGGCCG ACAGCGACCT CAACCGCGCG
ATCACCGCGC AGGAGTTCCG CGCCGCCGCC GCCGACCGCT TCGCCGATCT CGATCCGCAG
CAGACCAAGG CGCTGAGCTT CGCGCAGCTG CCCAAGACGC CCGCGCAGGT CGCGGCCAAC
GCGGCCTGCC TCGAGCGGGT CAAGGAGAAG GCGAAGGAGA AGCGGCGATG A
 
Protein sequence
MRQALLLALL LASPVAARRD GPPPVCPEPV RPVLFISPMG EPFRPKGAND DPGADDPVRR 
WFDQADRNKD GVLTVGELML DGDRFFATLD KDKSGELLPD EVSAYEQDVA PEIRLYQRRP
ERPADGGAKD DDRDRPRPAK RRGGRPGAGA GYDGAIGAGR YAFLNIPNPV AAADSDLNRA
ITAQEFRAAA ADRFADLDPQ QTKALSFAQL PKTPAQVAAN AACLERVKEK AKEKRR