| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2138 |
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| Symbol | ruvB |
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| ID | 5197138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2397312 |
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| End bp | 2398340 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640581683 |
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| Product | Holliday junction DNA helicase RuvB |
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| Protein accession | YP_001262635 |
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| Protein GI | 148555053 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
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| TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATA CCGATCGCCT CCTGTCCGCC GGCCGCCGCG CCGAGGACGT CGACGCCGCG
CTGCGGCCCC GGTCGCTCGA CGAATTCGTC GGGCAGCAGG CGGCGCGCGA CAATCTGCGC
GTGTTCATCG AGGCGGCGCG CCAGCGCGGC GACGCGCTCG ACCATGTGCT GTTCTTCGGC
CCGCCGGGCC TCGGCAAGAC GACGCTCGCG CAGATCATCG CCAAGGAGAT GGGGGCGGGG
TTCCGCGCCA CCTCCGGCCC GGTGATCGCC AAGTCGGGCG ACCTCGCGGC GCTGCTCACC
AACCTCGAGG ACGGCGACGT CCTGTTCATC GACGAGATCC ACCGTCTCCA GCCGCAGGTC
GAGGAGGTGC TCTATCCGGC GATGGAGGAT CGCGCGCTCG ACCTGATGAT CGGCGAGGGG
CCGTCGGCGC GCAGCGTGCG GATCGACCTG CCGCGCTTCA CCCTGGTCGG CGCGACGACG
CGGCAGGGGC TGATCACCAC GCCGCTGCGC GATCGCTTCG GCATCCCGAT CCGCCTGCAA
TTCTACACGG TCGAGGAGCT GGAGCGCGTG GTCAGCCGCG CCGCCCGCCT GCTCGACCTG
CCGATCGCCT CCGACGGCGC GATGGAGATC GCCCGGCGCG CGCGGGGCAC GCCCCGCATC
GCCGGTCGGC TGCTGCGCCG GGTGCGCGAT TTCGCCCATG TGCTGGGCGC GGACATCGTC
GACGCCAAGG TGGCGGACCA GTCGCTCAAC CGGCTCGAGG TCGACAATCT CGGCCTCGAC
GCGATGGACC GCCGCTACCT CCACATGATC GCCGACATCT ATCGCGGCGG CCCGGTCGGG
GTGGAGACGC TCGCCGCCGG CCTGTCCGAG CCGCGCGACA CGATCGAGGA CGTGATCGAG
CCCTATCTGA TCCAGCTCGG CCTGATCGCG CGCACCGCGC GGGGGCGCTG CCTCAACGGC
CGCGGCTGGA AGCATCTCGG CCTCAACCCG CCGCCCGAGG CGGGACAGGA CGGACTGTTC
GACGTTTAG
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| Protein sequence | MTDTDRLLSA GRRAEDVDAA LRPRSLDEFV GQQAARDNLR VFIEAARQRG DALDHVLFFG
PPGLGKTTLA QIIAKEMGAG FRATSGPVIA KSGDLAALLT NLEDGDVLFI DEIHRLQPQV
EEVLYPAMED RALDLMIGEG PSARSVRIDL PRFTLVGATT RQGLITTPLR DRFGIPIRLQ
FYTVEELERV VSRAARLLDL PIASDGAMEI ARRARGTPRI AGRLLRRVRD FAHVLGADIV
DAKVADQSLN RLEVDNLGLD AMDRRYLHMI ADIYRGGPVG VETLAAGLSE PRDTIEDVIE
PYLIQLGLIA RTARGRCLNG RGWKHLGLNP PPEAGQDGLF DV
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