| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2133 |
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| Symbol | tolB |
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| ID | 5196669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2393315 |
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| End bp | 2394634 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640581678 |
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| Product | translocation protein TolB |
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| Protein accession | YP_001262630 |
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| Protein GI | 148555048 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTTTC GCCTTGCCCT GTCGCTGCTG AGCCTGGCCC TGTTCGCCGC GCCCGCCGCG
GCCCAGCTCG AAGTCGACAT CACCGGCGGC ATCGCCCAGC CGATGCCGAT CGCCATCCCC
GGCATGCCGA CCCCGGCGGT CGCCAACACG CCGGCCGGCG ACACCGCCGC GCTCGGCCAG
CGCGTCGCCG ACGTCGTCAC CAACGACCTC AAGAACAGCG GCCTGTTCAG CCCGCTGCCG
AAGAGCGCGT TGCAGACCGT CACCCATCCG CAGGTGACCG CGCCCGATTA CATGTTCTGG
ACGCAGAGCG GCGCGCAGGC GCTGATCCAG GGCTTCGTCC AGGCCAATGG CGACGGGTCG
CTGACGGTCG GCTGCTATCT CTACGACGTG CTGGCGCGGA CCGAGCTGAC CCGCCAGGGC
TTCGTCGTCC AGCCGGCGCA GTGGCGCCGC GCCGCGCACA AATGCGCCGA CCTGGTCTAC
ACCCGCCTGA CCGGCGAGGG CCCCTATTTC GACAGCCGCG TGGTCTATGT CTCCGAGACC
GGGCCCAAGA CCAACCGCAT CAAGCGGCTG GCGATCATGG ACCAGGACGG CGCCAACCAC
CGCTTCCTGA CCAACGGCCA GACGATCGTG CTGACGCCGC GCTTCGCGCC GAACCAGCAG
ACGATCACCT ATATGTCCTA CACCAACAAC CGCGCGCGGG TATATGTGTA CGACATCGGA
TCGGGCAGCC AGCGGCTCGT CGTCGACCAG CCGAACATGA CCTTCGCGCC GCGCTTCTCG
CCCGACGGCC GTACCATCGT CTTCTCGATG GCGGTCGGCG GCAACACCGA CATCTACCGC
GTCTCGGCGG GCGGCGGCAC GCCGCAGCGG CTGACCACCT CGCCCGGCAT CGACACCGGC
GCCAGCTATT CGCCCGACGG ATCGAAGATC GTGTTCGAAA GCGACCGGTC GGGCACGCAG
CAGCTCTATG TGATGAACGC CGACGGCTCG AACCAGAACC GCATCAGCTT CGGATCGGGC
CGCTACGGCA GCGCCGCCTG GAGCCCGCGC GGCGATCTGA TCGCGTTCAC GAAGATCGGC
GGCGGCTTCA ACGTCGGCAT CATGAACATC GACGGATCGG GCGAGAAGAT CCTGACCAAC
GGCTGGCAGG ACGAGGGGCC GAGCTGGTCC CCCAACGGCC GGGTGATCAT GTTCTTCCGG
ACGGCGCAGG GGTCGGGCAA GGCCGATCTC TGGTCGGTCG ACCTGACCGG CGTCAACGAA
CGGCCGGTGC CGACGCCGCT CGACGGATCG GATCCGGCCT GGGGCCCGCT GCTGCCCTGA
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| Protein sequence | MRFRLALSLL SLALFAAPAA AQLEVDITGG IAQPMPIAIP GMPTPAVANT PAGDTAALGQ
RVADVVTNDL KNSGLFSPLP KSALQTVTHP QVTAPDYMFW TQSGAQALIQ GFVQANGDGS
LTVGCYLYDV LARTELTRQG FVVQPAQWRR AAHKCADLVY TRLTGEGPYF DSRVVYVSET
GPKTNRIKRL AIMDQDGANH RFLTNGQTIV LTPRFAPNQQ TITYMSYTNN RARVYVYDIG
SGSQRLVVDQ PNMTFAPRFS PDGRTIVFSM AVGGNTDIYR VSAGGGTPQR LTTSPGIDTG
ASYSPDGSKI VFESDRSGTQ QLYVMNADGS NQNRISFGSG RYGSAAWSPR GDLIAFTKIG
GGFNVGIMNI DGSGEKILTN GWQDEGPSWS PNGRVIMFFR TAQGSGKADL WSVDLTGVNE
RPVPTPLDGS DPAWGPLLP
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