| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2126 |
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| Symbol | ispG |
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| ID | 5198140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2387659 |
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| End bp | 2388918 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640581671 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_001262623 |
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| Protein GI | 148555041 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.148605 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAATG GAGCCAGTCG TCCCGGCTGC GGAGCGATGC TCCGCGAGGA TGCCGGCGAG
GGCCGGCGTG ACGGCTGTTC CAATGGATGG AATCAGCCTA TACGGGCGCC GAAGCTTTTC
AAAGAACGGA ATCCCATGTC CATCCGCCCG TGGCGCGACA TCCAGCGCCG TCCGTCGCGC
CAGATCATGG TCGGCAACGT CGCCGTCGGC GGCGGCGCGC CGGTCACCGT CCAGACGATG
ACCAACACCC CGACCGAGGA CGCGAAGGCG ACGATCGACC AGATCCGCCG CTGCGAGGAT
GCGGGCGCCG ACATCATCCG CGTCTCCTGC CCCGACGAGG CGTCGACCGC CGCGCTCCGG
CAGATCGTCC GCGCCGCGAA GGTGCCGATC GTCGCCGACA TCCATTTCCA CTACAAGCGC
GCGCTGGAGG CGGCCGATGC GGGTGCCGCC TGCCTGCGCA TCAACCCCGG CAATATCGGC
TCGGCCGAGC GCGTCGCCGA GGTCGTCCGC GCCGCCAAGG CGAACGGATG CTCGATGCGG
ATCGGCGTCA ACGCCGGCAG CCTCGAGAAG GACCTGCTGG AGAAATATGG CGAGCCCTGC
CCCGAGGCGC TGGTCGAAAG CGCGCTCGAC CATATCAAGC TGCTCCAGGA CCACGACTTC
CACGAGTACA AGGTCGCGGT GAAGGCGTCG GACGTGTTCC TCGCGGTGTC GGCCTATATG
GGGCTGGCCG AAGCGGTCGA CTGCCCGCTC CATCTGGGCA TCACCGAGGC GGGCGGGCTG
ATCGGCGGCA CCGTCAAGTC GGCGATCGGC ATCGGCAACC TGCTCTGGGC CGGGATCGGC
GACACGATCC GCGTCTCGCT GTCGGCCGAG CCCGAGGAGG AGGTCCGCGT CGGCTTCGAG
ATATTGAAGG CGCTCGGCAT CCGCAATCGC GGCGTCCGGG TCGTCTCCTG CCCGTCCTGC
GCGCGGCAGG GCTTCGACGT GATCCGCACC GTCCAGACGC TGGAGGAGCG GCTCCAGCAT
ATCCGCGTGC CGCTGTCGCT GTCGGTGCTC GGCTGCGTCG TCAACGGCCC CGGCGAGGCG
CGCGAGACCG ATATCGGCCT GACCGGCGGC GGCGCCGGCA AGCACATGGT CTATCTGTCG
GGCGTCACCG ACCACACCGT GCAGGACGCC GACATGGTCG ACCATATCGT CAAGCTGGTC
GAGGCGAAGG CCGCCGAGAT CGAGGCGGCC GAGGCGGCGC AGGCGCAAGC GGCCGAATGA
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| Protein sequence | MSNGASRPGC GAMLREDAGE GRRDGCSNGW NQPIRAPKLF KERNPMSIRP WRDIQRRPSR
QIMVGNVAVG GGAPVTVQTM TNTPTEDAKA TIDQIRRCED AGADIIRVSC PDEASTAALR
QIVRAAKVPI VADIHFHYKR ALEAADAGAA CLRINPGNIG SAERVAEVVR AAKANGCSMR
IGVNAGSLEK DLLEKYGEPC PEALVESALD HIKLLQDHDF HEYKVAVKAS DVFLAVSAYM
GLAEAVDCPL HLGITEAGGL IGGTVKSAIG IGNLLWAGIG DTIRVSLSAE PEEEVRVGFE
ILKALGIRNR GVRVVSCPSC ARQGFDVIRT VQTLEERLQH IRVPLSLSVL GCVVNGPGEA
RETDIGLTGG GAGKHMVYLS GVTDHTVQDA DMVDHIVKLV EAKAAEIEAA EAAQAQAAE
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