| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2113 |
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| Symbol | |
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| ID | 5197133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2374769 |
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| End bp | 2375806 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640581658 |
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| Product | 4-hydroxy-2-ketovalerate aldolase |
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| Protein accession | YP_001262610 |
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| Protein GI | 148555028 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR03217] 4-hydroxy-2-oxovalerate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTTCG ACGTCGGCAA GGACAAGCTC TACATCCAGG ACGTGACGCT GCGCGACGGC
ATGCACGCGA TCCGCCACAT GTACGGCATC GACCATGTCC GCGCGATCGC CCAGGCGCTC
GACGAGGCCG GGGTCGACGC GATCGAGGTC GCGCATGGCG ACGGCCTCAA CGGCGCCAGC
TTCAACTACG GCTTCGGCGC CCACACCGAC TGGGAATGGC TGGAGGCCGT CGCCGACGTG
CTGACCCGGT CGGTGCTGAC GACGCTGATC CTGCCCGGCG TCGGCACCGT CGACGAGCTG
CGCCGCGCCT ATGACATCGG CGTCCGCTCG GTCCGCGTCG CGACCCATTG CACCGAGGCG
GACGTCTCGA AGCAGCATAT CGGCATCGCC CGCGATCTCG GCATGGACGT GTCGGGCTTC
CTGATGATGA GCCACATGAT CGAGCCCGAG GCGCTCGCCC AGCAGGCGCT GCTGATGGAG
AGCTACGGCG CGCAGTGCGT CTATGTCACC GACAGCGGCG GCGCGCTCGA CATGGACGGG
GTGCGCGCCC GCTTCCAGGC CTATGACCGG GTGCTCAGGC CCGAGACGCA GCGCGGCATG
CACGCGCACC ACAACCTCTC GCTCGGCGTC GCCAACTCGA TCGTCGCGGC ACAGCAGGGC
GCGGTGCGGA TCGACGCCAG CCTCGCCGGC ATGGGCGCGG GCGCGGGCAA CGCCCCGCTA
GAGGTGTTCA TCGCCGCGGT CGACCGCAAG GGCTGGAACC ATGGCTGCGA CGTCAACGCG
CTGATGGACG CCGCCGAGGA TCTCGTCCGC CCGCTCCAGG ACCGCCCGGT CCGCGTCGAC
CGCGAGACGC TCGCGCTCGG CTATGCCGGC GTCTATTCGA GCTTCCTGCG CCATGCCGAG
AAGGCGGCGG CGGACTATGG CCTCGACACC CGCACCATCC TGGTCGAGCT CGGCCGCCGC
AAGATGGTCG GCGGACAGGA GGACATGATC GTCGACGTCG CCCTCGACCT CGTCCGCGAG
CGCGGCGCCG CGGCCTGA
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| Protein sequence | MSFDVGKDKL YIQDVTLRDG MHAIRHMYGI DHVRAIAQAL DEAGVDAIEV AHGDGLNGAS
FNYGFGAHTD WEWLEAVADV LTRSVLTTLI LPGVGTVDEL RRAYDIGVRS VRVATHCTEA
DVSKQHIGIA RDLGMDVSGF LMMSHMIEPE ALAQQALLME SYGAQCVYVT DSGGALDMDG
VRARFQAYDR VLRPETQRGM HAHHNLSLGV ANSIVAAQQG AVRIDASLAG MGAGAGNAPL
EVFIAAVDRK GWNHGCDVNA LMDAAEDLVR PLQDRPVRVD RETLALGYAG VYSSFLRHAE
KAAADYGLDT RTILVELGRR KMVGGQEDMI VDVALDLVRE RGAAA
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