Gene Swit_2103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2103 
Symbol 
ID5200297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2364209 
End bp2365363 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content71% 
IMG OID640581648 
ProductAcetyl-CoA acetyltransferase-like protein 
Protein accessionYP_001262600 
Protein GI148555018 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.655505 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGAGGC AGGCGTTTTC GGGCAAGGCG GCGATCGCCG GGGTCGGCTA TACGCGCTTC 
AGCCGCGAAT CCGGCCGGAC CGTGCTCGAC CTGACGATGG AGGCCGTCCA TGCGGCGGTC
GCCGACGCCG GTCTCGAAGG CCGCGACGTC GACGGGCTGC TGTCCTACGC CTTGTCTGAT
TCGGTGCCGA CCCACATGGT CGCGCGGATG CTCGGCCTCG CCGGCCATGG CTGGACCAAC
GACTATCATG GCGGCGGCAG CCAGGCGGCG GCGATCCTCG GCGACGCGGC GATGGTCGTC
GCGGCGGGGC TCGCCGAGAC GGTGGTGGTC TATCGCTCGC TCAACGGCCG CAGCGGCAAG
CGCATGGGGC AGATCTCGCT CGGGTCGAGC GATGGGATGG AGGAGCAGTT CCTCACCCCC
TACGGCTTTC GCGGGCCGGT CAACCTGTTC GCGCTGGCGG CGCAGCGCTA CCTCCACGAT
CGCGGCCTGG CGCCCGACGA ACTCGGCCCG CTGGTGGTGC GGCAGCGCGC CAAGGCGGTC
GCCAACCCCA AGGCGCTGCT GCGCGATCCG CTGACCATCG ACGACTATCG CGCCGCGCCG
ATGATCGCCT CGCCGCTGCG CCGGCTCGAC TGCTGCCTGG AGACCGACGC CGCCTGCGCG
ATCGTGGTGA CGACGCCCGA TCGGGCGCGC GCCCTGCGCA ACCGGCCGGT CCATATCCTC
GGCGCGATCC GCGCGGGCGG GCGCGGGGCC GGGGCGATGG ACAAGGCGGG CGACGATCCC
GCCCGCATCT TTTCCGCCCA TGTGGCGCCG CGCTTCTATG CCGCGACGGG TGTCGCGCCG
GCCGATATCG ACCTGGTGCA ATGCTACGAC GCCTATTCCT ACCTGATCCT CCAGCAGCTC
GAGGATTTCG GCTTCCTCGC CCCCGGCGAG GTCGCCGACT TCGCGGCCAG GGGCGAGGCG
GGGCGCGGCT TCGCGCTCAA CACCAATGGC GGGCTGCTGT CCGAAGGCTA TGTTCACGGC
CTCAACAACG TCGTCGAGGC GGTGGAGCAG CTCCAGGGCA AGGCGGGCGA CCGGCAGGTC
GAGGCCGCGA CCGCCCTGTG CACCGGCTTC GGCGGCAATT TCGGCTCGGC GCTGCTGCTC
GGGCTGGAGG CGTGA
 
Protein sequence
MERQAFSGKA AIAGVGYTRF SRESGRTVLD LTMEAVHAAV ADAGLEGRDV DGLLSYALSD 
SVPTHMVARM LGLAGHGWTN DYHGGGSQAA AILGDAAMVV AAGLAETVVV YRSLNGRSGK
RMGQISLGSS DGMEEQFLTP YGFRGPVNLF ALAAQRYLHD RGLAPDELGP LVVRQRAKAV
ANPKALLRDP LTIDDYRAAP MIASPLRRLD CCLETDAACA IVVTTPDRAR ALRNRPVHIL
GAIRAGGRGA GAMDKAGDDP ARIFSAHVAP RFYAATGVAP ADIDLVQCYD AYSYLILQQL
EDFGFLAPGE VADFAARGEA GRGFALNTNG GLLSEGYVHG LNNVVEAVEQ LQGKAGDRQV
EAATALCTGF GGNFGSALLL GLEA