Gene Swit_2099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2099 
Symbol 
ID5197320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2360150 
End bp2361304 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content74% 
IMG OID640581644 
Productbeta-lactamase 
Protein accessionYP_001262596 
Protein GI148555014 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.303658 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTGC GCGAGCGCAT CGAGGGCCGC TGGGACCCGG CCTTCCGCCG GGTCGCCGAC 
GCCTTTCTCG GGCTGTTCGA TCCCGCCCGC GACGGCGCGA CCGAGGTCGG CGCGGCGATG
TGCCTGATCG TCGAGGGGCG GGTCGTCGCC CATATCTGGG GCGGTGTCGC CGACAGCGCG
GGGACGCCGT GGCGGGCCGA GACCGCGCCC TGCGTCTTCT CCTGCACCAA GGGCGTGGCG
GCGAGCCTGT TCCACATCCT CGCTGAGAAG CACGGCGTCG ACTATGACGC GCCGGTCGCG
CGCTGGTGGC CCGAATTCGC CGCCGCCGGC AAGGCCGACA TCACCGTCCG CGAGCTGCTC
GCGCACCAGG CCGGGCTCGG CCGCCTGCCC GATCCGGCGG CGCCGGGCCA TGTCCTCGAC
TGGGACCGCG TCACGGCCGC GCTCGCCGCT GCGCCGGCCT TCGGGACGCG GCCGCGCCGG
TCGGGCTATC ATGCGCTGAC CTTCGGCTGG CTGGTCGGCG AGCTGATGAT GCGGATCGCC
GGCGACGATC TCGACACGCT GCTCGACCGC CATCTCAACG GGCCGCTCGG CACCCGCTTC
GCCTGGCGCG GCGCGGCGGT TCCGGCGGGC GGCGTCGCGA TGCTCGCCTC GGCCAATCCG
GGCGAACCGG TCTGGGCGAC CGACGGCGAC GCGCGCTTCG CCGGCGTCAC CTCGCTCGAC
GACTGGACCC TGCTGACGCC CGCCGTCGCC GCCTCGGCCG GCTGGCGCGC GGCCAACGGG
CTCGGCGCGG GCGGCCATTC GGACGCGTTC AGCCTCGCCA CCATTTATGC CGCGCTGATC
GACCGCCGCG CGCCGATCCT GCCGCGCGAA CGGCTCGCGC TCGCCACCGC CGAGCAATAT
CGCGGCGAGG ACGCGCTGCT CGGCAACGAC GTCGCCTATG GGCTGGGCTA CCAGCTTCCG
GCCGGCGGCG TCTCGCTCGG CCATGTCGAT GGGCCGGGCA CGGCGCTGTT CGGTCATAAG
GGCGCCTATG GATCGATCGG CGTCGCCGAT CCCGATCGCG GCTTCGCGCT CGGCTATGTC
ACCAATTTGT GCGGCGAGAT GGGCGATCGC AGCCGCAACG GGGCGCTGCT CGACGCGGCG
CTGGCCTGCT TCTGA
 
Protein sequence
MTVRERIEGR WDPAFRRVAD AFLGLFDPAR DGATEVGAAM CLIVEGRVVA HIWGGVADSA 
GTPWRAETAP CVFSCTKGVA ASLFHILAEK HGVDYDAPVA RWWPEFAAAG KADITVRELL
AHQAGLGRLP DPAAPGHVLD WDRVTAALAA APAFGTRPRR SGYHALTFGW LVGELMMRIA
GDDLDTLLDR HLNGPLGTRF AWRGAAVPAG GVAMLASANP GEPVWATDGD ARFAGVTSLD
DWTLLTPAVA ASAGWRAANG LGAGGHSDAF SLATIYAALI DRRAPILPRE RLALATAEQY
RGEDALLGND VAYGLGYQLP AGGVSLGHVD GPGTALFGHK GAYGSIGVAD PDRGFALGYV
TNLCGEMGDR SRNGALLDAA LACF