Gene Swit_2089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2089 
Symbol 
ID5200085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2349373 
End bp2350491 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content69% 
IMG OID640581634 
Productalcohol dehydrogenase 
Protein accessionYP_001262586 
Protein GI148555004 
COG category[C] Energy production and conversion 
COG ID[COG1062] Zn-dependent alcohol dehydrogenases, class III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.864443 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.876446 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCAG CCCTGTTGCA CCAAGACAGT AATACCCCCC GACTGGAAGA GGTCGCGGTC 
GAGGAGCCTC GCTTCGGCGA GGTGCTGGTC CGGATCGCCG CCTCGGGCAT CTGCGGGTCG
GACCTCCATG TCGTCCACAA CCGCAGCAAT GTCGGCAAGG ACCGGCCCGT CATCCTGGGC
CATGAGGGCG CGGGCGTGGT CGAGGCGGTC GGGCCCGGCG TCCGCGACCT CAAGCGCGGC
GATCATGTCG TGATGGCGAT GTTCGGGCCC TGCGGCCATT GCGACCCGTG CAACAGCGGC
AAGCTCCAGT TCTGCGACGG CCCCGAGTTC AAGAGCGCGG TCGGGCGCAT GGCCGACGAT
TCGACCCGCT TCTCGCAGGA CGGCCGCATG GTCTTCCCGA TGGTCGGGGT CGGCTCGCTC
GCCGAATATG CGGTGATGCG GGAGGCGATG CTGGTCAAGG TCGCGCCGCA CCTGCCGCTC
GACCGGCTCT GCTTCTGCGC CTGTTCGGTG ACGACCGGGC TCGGCGCGGT GTTCAACGTC
GCCAAGGTGA CGCCGGGGAC CAGCGTCGCG GTGATCGGCT GCGGCGGCGT CGGCCTCAAC
GTGATCCAGG GCGCGCGGAT CGCCGGTGCC TCGCGGATCA TCGCGATCGA CACCAACCGG
GCGAAGCTCG ACATCGCATC GAACATGGGC GCGACCGACC TGATCCAGAG CGGCGGCGAT
CCGGCCGAGG TCGACGCCGC GGTCAAGGCG CTCCAGCCGC GCGGCGTCGA CTTCGCCTTC
GAGGTGGTCG GCAACCATGC GCTGATCCGC CAGGCGGTCG GCTTCACCGG GCGCGGCGGG
ACGACGGTGA TGATCGGCGG CGTGCCCTGG GCGTCGGACG TCTCGGTCAA TGCCGGGCTG
CTGTTCGGCG AGCGCAAGCT GATGGGCTGC CTCGGCGGCG GCAATATCCC GGGGCGGGAG
ATTCCGCGCA TCGTCGGCCT CTACGAGCGC GGCATGCTCA AGCTTGACGA GTTGGTGGGG
AAGACCTTCG ATTTCGACGA CATCGGCGAA GCGATCGCCG AGGCCGACCG GGCGCAGACC
GCGAAGACCG TGGTCGCGAT CGACCGCGCC TTGCTCTGA
 
Protein sequence
MRAALLHQDS NTPRLEEVAV EEPRFGEVLV RIAASGICGS DLHVVHNRSN VGKDRPVILG 
HEGAGVVEAV GPGVRDLKRG DHVVMAMFGP CGHCDPCNSG KLQFCDGPEF KSAVGRMADD
STRFSQDGRM VFPMVGVGSL AEYAVMREAM LVKVAPHLPL DRLCFCACSV TTGLGAVFNV
AKVTPGTSVA VIGCGGVGLN VIQGARIAGA SRIIAIDTNR AKLDIASNMG ATDLIQSGGD
PAEVDAAVKA LQPRGVDFAF EVVGNHALIR QAVGFTGRGG TTVMIGGVPW ASDVSVNAGL
LFGERKLMGC LGGGNIPGRE IPRIVGLYER GMLKLDELVG KTFDFDDIGE AIAEADRAQT
AKTVVAIDRA LL