| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2087 |
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| Symbol | |
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| ID | 5200083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2345715 |
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| End bp | 2347448 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640581632 |
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| Product | amidohydrolase 3 |
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| Protein accession | YP_001262584 |
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| Protein GI | 148555002 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3653] N-acyl-D-aspartate/D-glutamate deacylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGGCG TTGCCGAACA TTTCGATCTG CTGATTCGCA ACGGCATCGT CGTCGACGGC
ACCGGCCTGC CGCGCCGCCG GCTCGACGTC GGCATCCGCG ACGGCAAGGT CGCCAAGTTC
GCGCATCTCG CGGAGGCGAC CGCCGACGAG GAGATCGACG CCAAGGGCTG CATCGTCGCG
CCCGGCATCG TCGATCCGCA CACCCATTAT GATCCGCAGA TCACCTTCGA TCCCTATGCC
ACCGTGTCCT GCTTCCACGG CGTGACGACG GTGCTGGCGG GCAATTGCGG CTTCTCGGTC
GCGCCGTGCA AGGCGGAGGA CCGTGAATAT CTGAAGGGCA TCTTCGCCCG GGTGGAGGAG
ATGAATCCGA TCGCGCTGGG CGCCGTCCGC TGGGACGAGT TCGAGACGTT CGACGAGTTC
CTCCAGACCC GCAAGGGCAG GCTTGGCATC AACTTCGCCT GCTATGTCGG CCATTCGAAC
CTGCGCCGCT GGGTGATGGG CGACGATTCG CACCGCCGCG CCGCGACCGA GGACGAGGTC
CGGCAGATGC GGGCGATGCT CGCCGAGGCG CTCGAGGCCG GGGCCGCCGG CCTCTCCTCC
TCGGCGGCGG CGGTGCATAT GGACATCAAC GGCGATCCGG TGCCGTCGCG CCTCGCCGAG
CGCAGCGAGT TCCTCGCGCT GGCCGAGGAG CTGGGCCGTT TCGGCAAGGG ATCGATCACC
TTCCTGCCGG CCAGCTCGAT CGGCGGCCTC AACGAGGAGG ACAAGGACTA TCTGATCGAG
CTCGGCAAGC GATCGGGCGT GCCGGTGATC ATCCAGGGGC TGGGCGGACG CAACAAGGTC
GATGCGCCGA CCGCGACCTG GGAGGCGTCG GTCGAGTTCC TCGACCGGGC GACGGCGGCG
GGCGCGCCGG TCTATTCGCT GCTGATCTCC CGCCCGTTCG ACCGGCCGGT CGTGTTCAGC
CCCGAATGTC CCCATTATGC GGCGGTCGCG TCGTGGCATG CGATGATGCG CCTGCCGAAG
GCGGAGCGCG ACGCCATGCT GCGCGATCCC GCCGCGCGCG ACGAGATGCG CCAGGCGGTC
GAGAACTACA ACCGCGACCC CAAGAAGGGC ACGATCCTGC CGCCGCCGCT GTGGACCGCT
TTGTTCGTCG ACCATGTCGC GAACGATCGC AACGCCGGGT TGCAGGGCAA GAGTGTCGCC
GAGATCGCCG AGGAGACGGG CAAGGCGCCC GGCGACGTGG TGCTCGACCT GCTGCTCGAC
GAGGACATGG CGACCGAGTT CCGCTGGCGC ACCGAGACGC CCGAATGGGC CGAGGCGGTG
CGCGTGGCGC AGCAGGACCC GCGCATGATC GTCGGCGTGT CCGACGGCGG CGCCCATCTC
GCCAAGGACG ACGCGGCCGA CTGGAGCTCC TACTTCCTGC GCTCCTGGGT GCTCGATCGC
GGCGCCTGGA CGCTGGAGGA GGGCATCCGC CAGATCACCC AGATCCCGGC CTCGCTGCTC
GGCCTGGTCG ATCGCGGCAC GCTGAAGGTG ACCGGCCCGG CGGACATCAT GATCTTCGAT
CCCGAGACGA TCGGCCCGTG GCGCAAGGAA TTCGCGCGCG ATCTGCCGGG CGGCGTCGGG
CGGTTCAAGG CGTGGGGCAA GGGCGTCAAG GCGACGATCG TCAACGGCCG GCCGATCGTC
CTCGACGGCG CGCTGACCAC AAACCTGCCG GGCGAGGTGG TCTCGCCGGC CTGA
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| Protein sequence | MTGVAEHFDL LIRNGIVVDG TGLPRRRLDV GIRDGKVAKF AHLAEATADE EIDAKGCIVA
PGIVDPHTHY DPQITFDPYA TVSCFHGVTT VLAGNCGFSV APCKAEDREY LKGIFARVEE
MNPIALGAVR WDEFETFDEF LQTRKGRLGI NFACYVGHSN LRRWVMGDDS HRRAATEDEV
RQMRAMLAEA LEAGAAGLSS SAAAVHMDIN GDPVPSRLAE RSEFLALAEE LGRFGKGSIT
FLPASSIGGL NEEDKDYLIE LGKRSGVPVI IQGLGGRNKV DAPTATWEAS VEFLDRATAA
GAPVYSLLIS RPFDRPVVFS PECPHYAAVA SWHAMMRLPK AERDAMLRDP AARDEMRQAV
ENYNRDPKKG TILPPPLWTA LFVDHVANDR NAGLQGKSVA EIAEETGKAP GDVVLDLLLD
EDMATEFRWR TETPEWAEAV RVAQQDPRMI VGVSDGGAHL AKDDAADWSS YFLRSWVLDR
GAWTLEEGIR QITQIPASLL GLVDRGTLKV TGPADIMIFD PETIGPWRKE FARDLPGGVG
RFKAWGKGVK ATIVNGRPIV LDGALTTNLP GEVVSPA
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