Gene Swit_2085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2085 
Symbol 
ID5196227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2344284 
End bp2344766 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content63% 
IMG OID640581630 
Producthypothetical protein 
Protein accessionYP_001262582 
Protein GI148555000 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGAGA CCGTCGACCC CAATCTCAAC AAGAAGGCCC GCTTCACCCA TCTCGACGAC 
TTCAAGTGGC AGGAGGTCCG CCGCCAGCAG CATGGCGACC GCACCGCCTC GGTCCGCGAG
AAGTGGATGG AGTTCTCCGA CAAATATCTG TCGCTCTACG CCGAATGGGA TGCGGGAATG
GTGGTCCGCC CGCACGGCCA CAACAGCAAC CACGTCGTCT TCGTCCTCGA CGGCGACATG
ATGTGCGGCG ACATCCATTG CCCGGCCGGC ACCCATATCG CGCTCGACAA GGGCGACACC
TTCGGCCCGT TCATCGCGGG GCCCGACGGG GTCAAGCTGT TCGAGGTGAT GATGGGCGAC
CCGCGCTCCT TCCCCGCCAA CCGCGAGGAT TATGAGAAGC TGCTCGTCGA CAAGGGCATC
GTCCCGCTTC CCAATCCGCC GATCGACATG CCGACCTGGC TGAAGGACAC GAGGAACAAC
TGA
 
Protein sequence
MDETVDPNLN KKARFTHLDD FKWQEVRRQQ HGDRTASVRE KWMEFSDKYL SLYAEWDAGM 
VVRPHGHNSN HVVFVLDGDM MCGDIHCPAG THIALDKGDT FGPFIAGPDG VKLFEVMMGD
PRSFPANRED YEKLLVDKGI VPLPNPPIDM PTWLKDTRNN