| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2084 |
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| Symbol | |
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| ID | 5196226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2342519 |
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| End bp | 2344282 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640581629 |
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| Product | 5-oxoprolinase (ATP-hydrolyzing) |
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| Protein accession | YP_001262581 |
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| Protein GI | 148554999 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0146] N-methylhydantoinase B/acetone carboxylase, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.81629 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGAGC CGACCGGCGG TGCCGTCGAA ACGAGCCGGG GGCTCGACCC GATCCTGTGC
GAGGTCGTCA AGAACAGCCT GATGCTGGTC GCGCAGGAGG CGGGCATCCG CGCCGCGCGC
AGCGCGGGAT CGACCTTCGT CGCGGCCTCG GCCGAGATCG CCTGCACCCT CTACGACGCC
GACGCCCGGC TGATCGCGCA GACCGAGGTC GGGATCATGC ACTCGGCCGC GCTGCGCGCG
ATGCTGCGGG CCGTGCTGCG CGATCATCCG CCCGAGACGC TGGTCGAGGG GGACGTGCTG
ATCGTCAACG ATCCCTTCGC CGGCGGCGTC CACCCGACCG ACGTCGGCGC TTTCCGCCCG
GTGTTCCACG AGGGCAGGCC CGCCTTCTAC TGCGGGTTGA TGATGATCGT GTCGGACCTG
GGCGGCCTGT CGTCGGGCGG CCTGCCGGCC AATGCCAGCG AATGCTTCCA CGAAGGGCTG
ACCATCCCGC CGACCAAGCT CTACCGCGCG GGCAAGCTCG ACGAGGCGGT GACGCGGCTG
ATCTGCTCGA ACAGTCGCAC CCCCGCCAAG CTGATGAGCG ACATCAACGC GCTGGCGGCG
GGCGGCAACG TCGCGGCGCT GCGGCTGGTG GAGATGGTCG CGAAGTTCGG CTACGAACCG
CTCGGCGCAA TGATCGACGA GCTGCTCGAC TATTCGGAGC GGCTGGTCCG CCAGGGCTTC
GCCGAGATGC CCGACGGCGT CTATACCGGC AGCTTCACGG TCGAGAATGA CGGCATCATC
CCCGACCGCG ACTATCCGGT CCATGTCCGG ATCGAGATCG ACGGATCGGA ATGCCGGCTC
GACTTCAGCG GCAGCGCGAA ACAGGCGACC GGCGCGATCA ATTCGACCGC GTCGCAGACC
CTGTCGTGCA TCAACTATGC GCTGCGCTGC CACCTCGACC CGACCATTCC GATGAACGAG
GGCTTCTACC GCCCGATCGA GGTGCTGCTG CCGCCGGGCA CGGTGGTGAA CTGCTCCTAT
CCCTCGGCGT GCAACATCCG GCTGGCGACG GGGCAGGCGG TGATCGACGC GGTGCTGCAG
GCGCTGTCGG TGATCGACGA GACCCGCTCG ATGGCGCCCG GCGCCACCGT CCACACCCTC
AACATCCAGG GCGCGACCCC GGACGGCGGC GGGCTGTGGA GCATGCTCGA CGTCTGCTTC
GGATCGTGCG GGGCGCGGCA CGGCGAGGAT GGCGGCGACG GCCTGCCGCT GCTGTTCCAC
GGTCAGGCCG GCTATGAGCG CAACCTCGAA GGCTATGAAT GGGGCCATCC GGTCCGTTAC
CGCTGCTACC GGCTGGCGCC CGACACCAGC GGTCCCGGCC GCTGGCGCGG CGGCGCGGGG
CTGGTCAAGG AGATCGAGTT CCAGACCGAC GTAGTGATCA CCGCGCGGGC CACCGACCGC
TTCGATCGCC CCCCGCCCGG CATCGAGGGC GGGCTGGCCG GCAGCGGCGC GGCCTGGATC
GTCAACCGCG GCGAGGCCGA CGAATATGCC CTGCCCGGCA AGATCACCAA CCACCGGCTG
AAGGCGGGCG ACGTGCTGAC CGTCATGTGC CCCGGCGGCG GCGGGCTGGG CGATCCGCTG
GAGCGCGATC CGGCGCTGGT GCTCGCCGAT GTCGAGGAGG GGATCGTCTC GATCGAGGCG
GCAAGGGAGG TTTACGGGGT CGTGCTCAAC GCGGATCGCA CCGACATCGA CAGAGCGGCG
ACCGAGGGGC TGCGCCGTGG CTGA
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| Protein sequence | MSEPTGGAVE TSRGLDPILC EVVKNSLMLV AQEAGIRAAR SAGSTFVAAS AEIACTLYDA
DARLIAQTEV GIMHSAALRA MLRAVLRDHP PETLVEGDVL IVNDPFAGGV HPTDVGAFRP
VFHEGRPAFY CGLMMIVSDL GGLSSGGLPA NASECFHEGL TIPPTKLYRA GKLDEAVTRL
ICSNSRTPAK LMSDINALAA GGNVAALRLV EMVAKFGYEP LGAMIDELLD YSERLVRQGF
AEMPDGVYTG SFTVENDGII PDRDYPVHVR IEIDGSECRL DFSGSAKQAT GAINSTASQT
LSCINYALRC HLDPTIPMNE GFYRPIEVLL PPGTVVNCSY PSACNIRLAT GQAVIDAVLQ
ALSVIDETRS MAPGATVHTL NIQGATPDGG GLWSMLDVCF GSCGARHGED GGDGLPLLFH
GQAGYERNLE GYEWGHPVRY RCYRLAPDTS GPGRWRGGAG LVKEIEFQTD VVITARATDR
FDRPPPGIEG GLAGSGAAWI VNRGEADEYA LPGKITNHRL KAGDVLTVMC PGGGGLGDPL
ERDPALVLAD VEEGIVSIEA AREVYGVVLN ADRTDIDRAA TEGLRRG
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