| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2082 |
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| Symbol | |
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| ID | 5196224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2339639 |
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| End bp | 2340397 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640581627 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001262579 |
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| Protein GI | 148554997 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.0994645 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCTGA ACGGACTTTC GGTGCTCGTC ACCGGCGCGG CGCAGGGCGT CGGCCGGGGG
ATCGCCCTCG CCGCCGCCGC CGAGGGCGCG GCCGTCGCCG TCACCGCGCG GCGGATCGAG
ACGGCGCAGG CCGTCGCCGA CGAGATCATC GCGCGGGGCG GCCGGGCGGC GGCGCTGACC
TGCGACGTCG GCGACCGCGC CAGCGTCGCG GCGGCGATCG CCGGCACGGT CGCGGCGTTC
GGCAAGCTCG ACGGGCTGGT CCACAACGCG GTCAGCGGCT TCTCCAGCGA GCCGGTCTCG
ATCGAGGATG TGCCCCAGGA CAATTGGGAC GACCAGCTGC GGGTCAGTTT CCGCGGCACG
CTCTATTGCG CGCAGGCGGC TTTCCCGGCG CTGCGCGACA GCCGGGGCAC GCTGGTGGTG
CTGACCTCCA ATGCCGGGAT CGAGGGCAAT CCCTCGCTGG CTCCCTATTC GGCGATGAAG
GGCGCGCAGC GCGGCTTCGT CAAGAGCCTG GCGCGCGAAT GGGGGCCGCT CGGCATAAGG
GTCAATGGCA TCGCCCCGGT CGCGCTGACC CCGGCGATGG ACAAATTCTT CGAGCTGCAT
CCGCACATGG TGCCGGTCAT CTCGAACCGC GCCGCGCTCG GCCGGATCGG CGATTGCGAA
AGCGACATCG GATCGGGCGT CGCCTTCCTG CTCGGGCCGC AGAGCCGGTT CGTCAGCGGC
CAGACGCTGA TCCTCACGGG CGGAGCCTAT ATGCTATGA
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| Protein sequence | MSLNGLSVLV TGAAQGVGRG IALAAAAEGA AVAVTARRIE TAQAVADEII ARGGRAAALT
CDVGDRASVA AAIAGTVAAF GKLDGLVHNA VSGFSSEPVS IEDVPQDNWD DQLRVSFRGT
LYCAQAAFPA LRDSRGTLVV LTSNAGIEGN PSLAPYSAMK GAQRGFVKSL AREWGPLGIR
VNGIAPVALT PAMDKFFELH PHMVPVISNR AALGRIGDCE SDIGSGVAFL LGPQSRFVSG
QTLILTGGAY ML
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