| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2079 |
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| Symbol | |
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| ID | 5198338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2336980 |
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| End bp | 2338251 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640581624 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001262576 |
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| Protein GI | 148554994 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.816032 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGATCG CAGTGGACGC AAACCAGCCG GAGGGTCGGC GGCTGCGCGG CTTCATCGCC
GAGGCGCCGA CCCCGACGGG GCGGGCGCGG GCGTTCCTCG CGCTGCTCCT GGTGCTGGTG
CCGCCGGTCT TCACCGCGAT GATGGGGACG CCGGTCGTGC CGATCATCCC GGCGGTGGCG
AAGCATTTCG GCGGCGGCGA CGCGGGCGCC TTCGCGGCGC AGATGATGGT GACGGTGCCG
TGCATCGGCG TGATCATCGG TGGCCCGATC GCCGGCTGGC TGATCGAGCG GATCGGCATC
CGCGCGGTGA TCATCGGCAG CGCGGTGCTG ATGGGGCTCG CGGGCATGGC CGGCGCCTTC
ACCCACGACA TCGCGCCGTT CCTGTTCAGC CGGCTGCTCG TCGGCTTCGG CGCGGCGGGG
GGCTATACCG CGCTGCTCAC CCTGGCGGGG CTGCTGTTCC AGGGGCGGAC GCTCGCCCGC
GTGCTCGGCT ATCAAGCGTC GGTCGCGGCG GTCGTGTCGA TGGGGTCGAT CATGATCTCC
GGCTATATCG CCGAGCACGT CGAATGGCGG GTGTCCTACG GCCTCTATGC GCTGGTGCTG
CTGTTCGTGC CGCTGGCGCT GCTCGGCCGC TGGCCCGCCC AGCCGGTATC GGTCCAGGCG
CGCGCGGCGG GGGCCGAGGC GTTCGGCCGC ATCTGGCCGA TCCTGCTGAT CATGATCCCG
ATCTACGCCG CCGCCTTCAT GTCGGTGGTG CAGGGGTCTT TCATGATGAC CGCCAACGGC
ATCACCAAGC CGACGCTCCA GTCGAGCCTG ATCGCGATGG CGACGATCAT GTTCACGATC
AGCTCGTGGA ACTATGGCCG GCTGCGCAGC CGGCTGTCGG GGTCGGCGAC CTTCGTGATC
GCGCTGCTGC TGCTCGGCGG CGGCATCGTC CTGATGGGCA GCCTCCACCC GGCCTGGGCG
ATGGGCCTGT CCTGCGCGAT GATGGGCGCG GGGGCGGGCA TCGCCACGCC CTATCTGTCG
CAGCAGATCC TCGAACGGGT GACGGCGGAG CAGCGCGGCC GCGCGGTCGG CTTCATCGCC
CCGGCGCATT ATCTGGGCGA GTTCGCCAAC CCGTTCATCA TGCATCCGCT GCGGATGGCG
ATCGGCATCC ACGCCGCCTT CATCCTGTTC GGGGCGTTCA TCATGCTCGG CGCGCTGTTC
GCCTTGCGCG CGAACCGCAA GCCCGTCGGC CCCGATCCCG AACCGGCGCC CGAACCGGCG
GTCGCGGCAT GA
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| Protein sequence | MAIAVDANQP EGRRLRGFIA EAPTPTGRAR AFLALLLVLV PPVFTAMMGT PVVPIIPAVA
KHFGGGDAGA FAAQMMVTVP CIGVIIGGPI AGWLIERIGI RAVIIGSAVL MGLAGMAGAF
THDIAPFLFS RLLVGFGAAG GYTALLTLAG LLFQGRTLAR VLGYQASVAA VVSMGSIMIS
GYIAEHVEWR VSYGLYALVL LFVPLALLGR WPAQPVSVQA RAAGAEAFGR IWPILLIMIP
IYAAAFMSVV QGSFMMTANG ITKPTLQSSL IAMATIMFTI SSWNYGRLRS RLSGSATFVI
ALLLLGGGIV LMGSLHPAWA MGLSCAMMGA GAGIATPYLS QQILERVTAE QRGRAVGFIA
PAHYLGEFAN PFIMHPLRMA IGIHAAFILF GAFIMLGALF ALRANRKPVG PDPEPAPEPA
VAA
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